RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ARHGAP10A1A4S6 786 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ANGPT2O15123 496 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 B3GALNT1O75752 331 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 HSPA13P48723 471 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ATP13A5Q4VNC0 1218 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 SAMD4BQ5PRF9 694 aaKnown RBP13.51□□□□□ -0.25
VCP-207ENST00000493886 MYLIPQ8WY64 445 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 VMP1Q96GC9 406 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 EPB41L1Q9H4G0 881 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 PIF1Q9H611 641 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 RIC8BQ9NVN3 520 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ELOVL2Q9NXB9 296 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 TBC1D14Q9P2M4 693 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 B4GALT6Q9UBX8 382 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 NME4O00746 187 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 OR7A17O14581 309 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 CAPN1P07384 714 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 C1SP09871 688 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 EPCAMP16422 314 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 HSPA7P48741 367 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 DMC1Q14565 340 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 PHKG1Q16816 387 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ZNF557Q8N988 423 aaPredicted RBP13.5□□□□□ -0.25
VCP-207ENST00000493886 OR2A12Q8NGT7 310 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 METTL6Q8TCB7 284 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 COPS8Q99627 209 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 EGFL8Q99944 293 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ABCG8Q9H221 673 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ATAD3AQ9NVI7 634 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ST14Q9Y5Y6 855 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 HCFC2Q9Y5Z7 792 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 TAPBPO15533 448 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 MRPL19P49406 292 aaKnown RBP13.5□□□□□ -0.25
VCP-207ENST00000493886 NR1H2P55055 460 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 TTLL9Q3SXZ7 439 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 TMEM215Q68D42 235 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 BLOC1S3Q6QNY0 202 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 GDPD4Q6W3E5 623 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 TMEM126BQ8IUX1 230 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 OR4F6Q8NGB9 312 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ZNF597Q96LX8 424 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ZSWIM3Q96MP5 696 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 LATS2Q9NRM7 1088 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 WNT6Q9Y6F9 365 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 MTHFD1P11586 935 aaKnown RBP13.5□□□□□ -0.25
VCP-207ENST00000493886 OXTRP30559 389 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 IRS1P35568 1242 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 RECQLP46063 649 aaPredicted RBP13.5□□□□□ -0.25
VCP-207ENST00000493886 SPINT3P49223 89 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 ERVK-8P63133 956 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 B4GALNT1Q00973 533 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 TRAP1Q12931 704 aaKnown RBP13.5□□□□□ -0.25
VCP-207ENST00000493886 GRIK2Q13002 908 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 TBCELQ5QJ74 424 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 Q6ZSR9 355 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 CBR4Q8N4T8 237 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 NAT16Q8N8M0 369 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 GPATCH1Q9BRR8 931 aaKnown RBP13.5□□□□□ -0.25
VCP-207ENST00000493886 C1orf50Q9BV19 199 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 IPPKQ9H8X2 491 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 KCTD5Q9NXV2 234 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
VCP-207ENST00000493886 PLXNB3Q9ULL4 1909 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 TCRBV3S1A0A5B6 114 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 WASH3PC4AMC7 463 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 XYLBO75191 536 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 STAMBPO95630 424 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 OTCP00480 354 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 GSTT2P0CG29 244 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 GSTT2BP0CG30 244 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 SLC7A1P30825 629 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 HOXA9P31269 272 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 HTR6P50406 440 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 CRY1Q16526 586 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 HABP4Q5JVS0 413 aaKnown RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 PRSS36Q5K4E3 855 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 C6orf136Q5SQH8 315 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 ZDHHC20Q5W0Z9 365 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 SPRED2Q7Z698 418 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 LEMD2Q8NC56 503 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 LSM14AQ8ND56 463 aaKnown RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 VPS37AQ8NEZ2 397 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 VPS33AQ96AX1 596 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 RMND5BQ96G75 393 aaPredicted RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 TEX37Q96LM6 180 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 HOPXQ9BPY8 73 aaPredicted RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 BRINP2Q9C0B6 783 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 WWOXQ9NZC7 414 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 ZMAT5Q9UDW3 170 aaKnown RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 ERVW-1Q9UQF0 538 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 CEPT1Q9Y6K0 416 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 SOBPA7XYQ1 873 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 SYNCRIPO60506 623 aaKnown RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 KATNA1O75449 491 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 NCK1P16333 377 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 POLR2EP19388 210 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms