RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, human

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-208	ENST00000493507	HERPUD2	Q9BSE4	406 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	GATA5	Q9BWX5	397 aa	Predicted RBP	4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	TM2D2	Q9BX73	214 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	RAB6C	Q9H0N0	254 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	GAN	Q9H2C0	597 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	SNX25	Q9H3E2	840 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	TAB2	Q9NYJ8	693 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	KLHL13	Q9P2N7	655 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	RWDD2A	Q9UIY3	292 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	TSPAN16	Q9UKR8	245 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	BAG5	Q9UL15	447 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	ASB3	Q9Y575	518 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	CPQ	Q9Y646	472 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	PIAS3	Q9Y6X2	628 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	CACNA1G	O43497	2377 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	MAP1B	P46821	2468 aa	Known RBP	4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	PI4KA	P42356	2102 aa		4.99	□□□□□ -1.61
CCNB3-208	ENST00000493507	LAMA1	P25391	3075 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ACACB	O00763	2458 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	YJEFN3	A6XGL0	299 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	KCNU1	A8MYU2	1149 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507		E7ENQ6	273 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	PSMA7	O14818	248 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ZNF263	O14978	683 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CHAD	O15335	359 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	MSI1	O43347	362 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	KCNK5	O95279	499 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SMC2	O95347	1197 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ZNF806	P0C7X5	589 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	KRT13	P13646	458 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ZNF18	P17022	549 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TFEB	P19484	476 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	PON1	P27169	355 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SERPINA4	P29622	427 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CDC25C	P30307	473 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ANP32A	P39687	249 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ARHGAP25	P42331	645 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TUFM	P49411	452 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	RGS7	P49802	495 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CCR3	P51677	355 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	AP3M2	P53677	418 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SLC37A1	P57057	533 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	YPEL5	P62699	121 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	RPL10A	P62906	217 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SLC7A9	P82251	487 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ADIG	Q0VDE8	80 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	STIM1	Q13586	685 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TAF5	Q15542	800 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TIGD6	Q17RP2	521 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SGSM1	Q2NKQ1	1148 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CCDC40	Q4G0X9	1142 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CYP4A22	Q5TCH4	519 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SNX30	Q5VWJ9	437 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	MORN5	Q5VZ52	161 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TCEAL6	Q6IPX3	200 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	PMF1	Q6P1K2	205 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TRIM65	Q6PJ69	517 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	DHRS13	Q6UX07	377 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	KBTBD6	Q86V97	674 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	LONP2	Q86WA8	852 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	UNC93A	Q86WB7	457 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	DHX40	Q8IX18	779 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	NUP93	Q8N1F7	819 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ELMOD1	Q8N336	334 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SPEM1	Q8N4L4	309 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	NKAP	Q8N5F7	415 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TRIML1	Q8N9V2	468 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	LEMD2	Q8NC56	503 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	OR6Y1	Q8NGX8	325 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	PRSS3P2	Q8NHM4	247 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	SLC20A1	Q8WUM9	679 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	DEPDC1B	Q8WUY9	529 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TAF4B	Q92750	862 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TCEAL3	Q969E4	200 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	FBXO32	Q969P5	355 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TRIM63	Q969Q1	353 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ERLEC1	Q96DZ1	483 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	GPR78	Q96P69	363 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	DUSP16	Q9BY84	665 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ULBP1	Q9BZM6	244 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CYP3A43	Q9HB55	503 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	TRPV5	Q9NQA5	729 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	RMND1	Q9NWS8	449 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	XPO7	Q9UIA9	1087 aa	Known RBP	4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	RAB23	Q9ULC3	237 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ARHGAP26	Q9UNA1	814 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	EPG5	Q9HCE0	2579 aa		4.98	□□□□□ -1.61
CCNB3-208	ENST00000493507	ZFHX4	Q86UP3	3567 aa		4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507	TRAV19	A0A0A6YYK7	116 aa		4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507	GOLGA6L4	A6NEF3	574 aa		4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507		K7EQS6	105 aa		4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507	ZNF197	O14709	1029 aa		4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507	PAPSS1	O43252	624 aa	Predicted RBP	4.97	□□□□□ -1.61
CCNB3-208	ENST00000493507	LRP3	O75074	770 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms