RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	IARS2	Q9NSE4	1012 aa	Known RBP	13.45	□□□□□ -0.26
PTPN7-215	ENST00000492451	GRHL1	Q9NZI5	618 aa		13.45	□□□□□ -0.26
PTPN7-215	ENST00000492451	PISD	Q9UG56	409 aa		13.45	□□□□□ -0.26
PTPN7-215	ENST00000492451	CDYL	Q9Y232	598 aa		13.45	□□□□□ -0.26
PTPN7-215	ENST00000492451	CTAGE15	A4D2H0	777 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR6C74	A6NCV1	312 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR5K3	A6NET4	321 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451		A8MU76	341 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	MATN2	O00339	956 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	NIPSNAP2	O75323	286 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CTAGE8	P0CG41	777 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	ERVK-10	P10266	1014 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	ATP5D	P30049	168 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	LEPR	P48357	1165 aa	Known RBP	13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CSE1L	P55060	971 aa	Known RBP	13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	PRKAA1	Q13131	559 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	TTLL9	Q3SXZ7	439 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZNF789	Q5FWF6	425 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	TMEM164	Q5U3C3	297 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	IRGC	Q6NXR0	463 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	TTC23L	Q6PF05	361 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	UNC5D	Q6UXZ4	953 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CLEC14A	Q86T13	490 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CTAGE6	Q86UF2	777 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	ANKMY2	Q8IV38	441 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CNTN4	Q8IWV2	1026 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CTAGE4	Q8IX94	777 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	FBXO36	Q8NEA4	188 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR5K2	Q8NHB8	316 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	PYROXD1	Q8WU10	500 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CD180	Q99467	661 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	LRRC1	Q9BTT6	524 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	PHACTR1	Q9C0D0	580 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	PPAN	Q9NQ55	473 aa	Known RBP	13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	HRASLS2	Q9NWW9	162 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	KLHL42	Q9P2K6	505 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	KLHL3	Q9UH77	587 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	PCDHGA7	Q9Y5G6	932 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CACNA1G	O43497	2377 aa		13.44	□□□□□ -0.26
PTPN7-215	ENST00000492451	CDRT15L2	A8MXV6	281 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451		B4E171	279 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	NVL	O15381	856 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	RASSF9	O75901	435 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	HAUS5	O94927	633 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	HGF	P14210	728 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	SHMT2	P34897	504 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	EIF2S3	P41091	472 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	TSPAN7	P41732	249 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	CARS	P49589	748 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	PLTP	P55058	493 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	GFER	P55789	205 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	PCBP4	P57723	403 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	ABR	Q12979	859 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	PRKG2	Q13237	762 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	GLE1	Q53GS7	698 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	PRSS42	Q7Z5A4	293 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	GALNT7	Q86SF2	657 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	AMIGO1	Q86WK6	493 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	VRK3	Q8IV63	474 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZBED8	Q8IZ13	594 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	UNC5B	Q8IZJ1	945 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	CARF	Q8N187	725 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	CEP112	Q8N8E3	955 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR4E2	Q8NGC2	313 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR52E1	Q8NGJ3	308 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR5AR1	Q8NGP9	310 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	SNIP1	Q8TAD8	396 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	JPH3	Q8WXH2	748 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	UBXN4	Q92575	508 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	KCNJ9	Q92806	393 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	FOPNL	Q96NB1	174 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	WDR83	Q9BRX9	315 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	HGH1	Q9BTY7	390 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	PLAC1	Q9HBJ0	212 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	IGSF10	Q6WRI0	2623 aa		13.43	□□□□□ -0.26
PTPN7-215	ENST00000492451	LOC400499	M0QZD8	3231 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	RRP8	O43159	456 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	VPS26A	O75436	327 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	GSTA2	P09210	222 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	FGF3	P11487	239 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ITIH1	P19827	911 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	MAPK10	P53779	464 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	RAB15	P59190	212 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	MPP1	Q00013	466 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	SLC7A5	Q01650	507 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	MGAT5	Q09328	741 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ILF2	Q12905	390 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	FASTKD3	Q14CZ7	662 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	TEDDM1	Q5T9Z0	273 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	CACHD1	Q5VU97	1274 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	UGT3A1	Q6NUS8	523 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZNF549	Q6P9A3	640 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	CYB5D1	Q6P9G0	228 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	CNST	Q6PJW8	725 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	FAM92B	Q6ZTR7	304 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	FAM129C	Q86XR2	697 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	KMT5C	Q86Y97	462 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	DCUN1D3	Q8IWE4	304 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms