RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 SMARCAL1Q9NZC9 954 aa10.92□□□□□ -0.66
DUBR-204ENST00000490441 SERTAD3Q9UJW9 196 aa10.92□□□□□ -0.66
DUBR-204ENST00000490441 PLAAQ9Y263 795 aa10.92□□□□□ -0.66
DUBR-204ENST00000490441 MED13Q9UHV7 2174 aa10.92□□□□□ -0.66
DUBR-204ENST00000490441 TTLL8A6PVC2 850 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 C9J4A7 227 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 F8W8V4 182 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 K7EM74 188 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 BTN3A3O00478 584 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 BTN3A1O00481 513 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 AP2A2O94973 939 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 AP2A1O95782 977 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 RAB40ALP0C0E4 278 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ST6GAL1P15907 406 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 PDHA2P29803 388 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 NSG1P42857 185 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 LMAN1P49257 510 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 CDKN1CP49918 316 aaPredicted RBP10.91□□□□□ -0.66
DUBR-204ENST00000490441 CCL11P51671 97 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 MLLT10P55197 1068 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ITGA1P56199 1179 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 KIF5AQ12840 1032 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ABRQ12979 859 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 CHAF1BQ13112 559 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 PRKG2Q13237 762 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 IL10RAQ13651 578 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 DBN1Q16643 649 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 PLEKHS1Q5SXH7 462 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 PRAMEF17Q5VTA0 474 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 CPZQ66K79 652 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 KCTD11Q693B1 232 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 RAD9BQ6WBX8 426 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ZNF517Q6ZMY9 492 aaPredicted RBP10.91□□□□□ -0.66
DUBR-204ENST00000490441 LINC00523Q86TU6 105 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 LAPTM4BQ86VI4 370 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 KLHDC8BQ8IXV7 354 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 SYTL1Q8IYJ3 562 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 GPR135Q8IZ08 494 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 DSELQ8IZU8 1212 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 CLDN19Q8N6F1 224 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ENDOVQ8N8Q3 282 aaKnown RBP10.91□□□□□ -0.66
DUBR-204ENST00000490441 PHC3Q8NDX5 983 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 OR1L3Q8NH93 324 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 CDKN2AIPNLQ96HQ2 116 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 TTC1Q99614 292 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 NLNQ9BYT8 704 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 TRIM55Q9BYV6 548 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 PITPNM3Q9BZ71 974 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ING2Q9H160 280 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ACTR10Q9NZ32 417 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ANKMY1Q9P2S6 941 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 ASF1AQ9Y294 204 aa10.91□□□□□ -0.66
DUBR-204ENST00000490441 REXO2Q9Y3B8 237 aaKnown RBP10.91□□□□□ -0.66
DUBR-204ENST00000490441 CCDC78A2IDD5 438 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 E7EQ34 232 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 LIN7AO14910 233 aaPredicted RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 KDM1AO60341 852 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 METTL18O95568 372 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 FTH1P02794 183 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 HBQ1P09105 142 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 MSL3P1P0C860 447 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 PRSS56P0CW18 603 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 AGXTP21549 392 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 MSNP26038 577 aaKnown RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 SHMT2P34897 504 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 PTGIRP43119 386 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 LAMB3Q13751 1172 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 BOP1Q14137 746 aaKnown RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 ITIH4Q14624 930 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 SYTL3Q4VX76 610 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 HOMEZQ8IX15 550 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 FAM26EQ8N5C1 309 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 TAB3Q8N5C8 712 aaPredicted RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 DNAAF3Q8N9W5 541 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 SLC38A9Q8NBW4 561 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 ELMO1Q92556 727 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 MIB2Q96AX9 1013 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 TRAPPC9Q96Q05 1148 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 BAG1Q99933 345 aaPredicted RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 C17orf62Q9BQA9 187 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 DPH2Q9BQC3 489 aaPredicted RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 KLHL25Q9H0H3 589 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 XKR8Q9H6D3 395 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 PCMTD2Q9NV79 361 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 PIH1D1Q9NWS0 290 aaKnown RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 TCFL5Q9UL49 500 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 PACSIN2Q9UNF0 486 aaPredicted RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 PADI2Q9Y2J8 665 aa10.9□□□□□ -0.66
DUBR-204ENST00000490441 PCDHGA9Q9Y5G4 932 aaKnown RBP10.9□□□□□ -0.66
DUBR-204ENST00000490441 USP9YO00507 2555 aaPredicted RBP10.89□□□□□ -0.67
DUBR-204ENST00000490441 ERI2A8K979 691 aaKnown RBP10.89□□□□□ -0.67
DUBR-204ENST00000490441 E7EVH7 732 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 VPS4BO75351 444 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 TMEM63AO94886 807 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 FTCDO95954 541 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 PDGFAP04085 211 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 OR56A5P0C7T3 313 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 PVRP15151 417 aa10.89□□□□□ -0.67
DUBR-204ENST00000490441 RORAP35398 523 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms