RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FAM149AA5PLN7 773 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 UBXN8O00124 270 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 NUDT21O43809 227 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 IGHV2-70P01814 119 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 JUNBP17275 347 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 S1PR1P21453 382 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CHRNA5P30532 468 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 SOX6P35712 828 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 F2RL1P55085 397 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 NUCB2P80303 420 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ACAP1Q15027 740 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF528Q3MIS6 628 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 MDH1BQ5I0G3 518 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 AKNAD1Q5T1N1 836 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CLEC6AQ6EIG7 209 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 BRAT1Q6PJG6 821 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 FAM159AQ6UWV7 190 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF534Q76KX8 674 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ARHGAP24Q8N264 748 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 LPCAT1Q8NF37 534 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 OR6J1Q8NGC5 347 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 U2AF1L4Q8WU68 220 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 MSI2Q96DH6 328 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 COQ2Q96H96 371 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CDRT15Q96T59 188 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 SPAG8Q99932 426 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 OSBPL8Q9BZF1 889 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 SLC5A7Q9GZV3 580 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 SUDS3Q9H7L9 328 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 MAU2Q9Y6X3 613 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 GAGE12JA6NER3 117 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 NEMP2A6NFY4 417 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C2orf81A6NN90 581 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 H0YIZ8 118 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PDLIM1O00151 329 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 BIN1O00499 593 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 MATN3O15232 486 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 AP5Z1O43299 807 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 MFAP3LO75121 409 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 IDH1O75874 414 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PLGP00747 810 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 GH2P01242 217 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 LMNAP02545 664 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C9P02748 559 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 TPM1P09493 284 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 FCGR2AP12318 317 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PDGFRAP16234 1089 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PPP3CBP16298 524 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PTPN6P29350 595 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 NCBP1Q09161 790 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 IL24Q13007 206 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ZRSR1Q15695 479 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 RUNDC3AQ59EK9 446 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PAPD7Q5XG87 772 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CES3Q6UWW8 571 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PATL1Q86TB9 770 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 LCORLQ8N3X6 602 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 FAM47BQ8NA70 645 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 OR52K1Q8NGK4 314 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 TAAR8Q969N4 342 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ITFG2Q969R8 447 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 SPATA33Q96N06 139 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 GPR78Q96P69 363 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 EGLN1Q9GZT9 426 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ATG10Q9H0Y0 220 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PCDH9Q9HC56 1237 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 FAM53CQ9NYF3 392 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CPSF3Q9UKF6 684 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 RNF115Q9Y4L5 304 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 KLK4Q9Y5K2 254 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 POMT1Q9Y6A1 747 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 COL5A3P25940 1745 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 TNS1Q9HBL0 1735 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C5P01031 1676 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C17orf102A2RUQ5 167 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ZSCAN5BA6NJL1 495 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 FAM90A26D6RGX4 464 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 M0QX08 132 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 HBP1O60381 514 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 KLHL41O60662 606 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF217O75362 1048 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 SOAT1P35610 550 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 LHX1P48742 406 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 GNAQP50148 359 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 TSPY1Q01534 308 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CFHR1Q03591 330 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CCDC15Q0P6D6 951 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CAMK2DQ13557 499 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ENPP2Q13822 863 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 TXNRD1Q16881 649 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 EARS2Q5JPH6 523 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ARSKQ6UWY0 536 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 KCTD9Q7L273 389 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 GRASPQ7Z6J2 395 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 HOOK3Q86VS8 718 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C1orf210Q8IVY1 113 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 CHERPQ8IWX8 916 aaKnown RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C4orf19Q8IY42 314 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 OR56B2PQ8NGI1 322 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 OR56B1Q8NGI3 324 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms