RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 EVLQ9UI08 416 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SCOCQ9UIL1 159 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CRLS1Q9UJA2 301 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PTBP2Q9UKA9 531 aaKnown RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PPM1HQ9ULR3 514 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 AP3M1Q9Y2T2 418 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ST14Q9Y5Y6 855 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 GPC6Q9Y625 555 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PRSS51A0A1B0GVH4 220 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 A0A1W2PP18 115 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 SHISA7A6NL88 538 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 AQP12BA6NM10 295 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ARNTLO00327 626 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 FBP2O00757 339 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 FFAR2O15552 330 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 OR1I1O60431 355 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 EEDO75530 441 aaKnown RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 SIX3O95343 332 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 BAG2O95816 211 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 MT-CO1P00395 513 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ASGR2P07307 311 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 C8GP07360 202 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ALDOCP09972 364 aaKnown RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 OR56A5P0C7T3 313 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 CYP2A6P11509 494 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PABPC1P11940 636 aaKnown RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 HGFP14210 728 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ACPPP15309 386 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 BPIP17213 487 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 GGT5P36269 586 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 NNMTP40261 264 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 RECQLP46063 649 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 HNMTP50135 292 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 CCR3P51677 355 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 CDH13P55290 713 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 KCNK10P57789 538 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 EMX2Q04743 252 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 FCHO2Q0JRZ9 810 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TDGQ13569 410 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 KIF19Q2TAC6 998 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 AASDHQ4L235 1098 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ATP6AP1LQ52LC2 224 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TMEM31Q5JXX7 168 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 IZUMO2Q6UXV1 221 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 AQP12AQ8IXF9 295 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 CPNE9Q8IYJ1 553 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 UBALD2Q8IYN6 164 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 AADATQ8N5Z0 425 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PAF1Q8N7H5 531 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 HMGCLL1Q8TB92 370 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 WFIKKN2Q8TEU8 576 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PYDC1Q8WXC3 89 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 EDAQ92838 391 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 IRF7Q92985 503 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 EXT2Q93063 718 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 EID2BQ96D98 161 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 MOCOSQ96EN8 888 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ASIC4Q96FT7 647 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PPP1R36Q96LQ0 422 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PPP3R2Q96LZ3 170 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 LRGUKQ96M69 825 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 COPS8Q99627 209 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 FAM83CQ9BQN1 747 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 GPATCH1Q9BRR8 931 aaKnown RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 NTMT1Q9BV86 223 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 SLC29A3Q9BZD2 475 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TM6SF2Q9BZW4 377 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 CIPCQ9C0C6 399 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TNFRSF12AQ9NP84 129 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TRPV5Q9NQA5 729 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 ADA2Q9NZK5 511 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PKD2L2Q9NZM6 624 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 PDP2Q9P2J9 529 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 HECAQ9UBI9 543 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 DKK3Q9UBP4 350 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TRPS1Q9UHF7 1281 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 LEF1Q9UJU2 399 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 INTS6Q9UL03 887 aaKnown RBP8.3□□□□□ -1.08
VTI1A-207ENST00000489357 DUSP12Q9UNI6 340 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 GPR45Q9Y5Y3 372 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 TICRRQ7Z2Z1 1910 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 CACNA1IQ9P0X4 2223 aa8.3□□□□□ -1.08
VTI1A-207ENST00000489357 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 TCRBV3S1A0A5B6 114 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 FAM234BA2RU67 622 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 CDC14CA4D256 554 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 A6NHS1 94 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 NPIPB8E9PQR5 432 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 K7ERQ8 282 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 PSMD11O00231 422 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 SLC28A1O00337 649 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 SMAD6O43541 496 aaKnown RBP8.29□□□□□ -1.08
VTI1A-207ENST00000489357 DENRO43583 198 aaKnown RBP8.29□□□□□ -1.08
VTI1A-207ENST00000489357 AP1G1O43747 822 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 NUAK1O60285 661 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 SMNDC1O75940 238 aaKnown RBP eCLIP8.29□□□□□ -1.08
VTI1A-207ENST00000489357 PRAMEF12O95522 483 aa8.29□□□□□ -1.08
VTI1A-207ENST00000489357 SRPRAP08240 638 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms