RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SLC5A10A0PJK1 596 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 C21orf140B9A014 251 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 FGGP02679 453 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 ST6GAL1P15907 406 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 ACADLP28330 430 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 PRAMEP78395 509 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 SEMA3AQ14563 771 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 FAM199XQ6PEV8 388 aaPredicted RBP22.31■■□□□ 1.16
COL9A3-213ENST00000489045 DRICH1Q6PGQ1 229 aaPredicted RBP22.31■■□□□ 1.16
COL9A3-213ENST00000489045 TRIM58Q8NG06 486 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 RUFY1Q96T51 708 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 PITPNM3Q9BZ71 974 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 TRIM4Q9C037 500 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 FANCEQ9HB96 536 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 EIF2B3Q9NR50 452 aaKnown RBP22.31■■□□□ 1.16
COL9A3-213ENST00000489045 LATS2Q9NRM7 1088 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 DRG1Q9Y295 367 aaKnown RBP22.31■■□□□ 1.16
COL9A3-213ENST00000489045 ZKSCAN5Q9Y2L8 839 aa22.31■■□□□ 1.16
COL9A3-213ENST00000489045 CDC14CA4D256 554 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 C2orf74A8MZ97 194 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 SUV39H1O43463 412 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 CREG1O75629 220 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 SESN2P58004 480 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-213ENST00000489045 CCZ1BP86790 482 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 CCZ1P86791 482 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-213ENST00000489045 FASTKD1Q53R41 847 aaKnown RBP22.3■■□□□ 1.16
COL9A3-213ENST00000489045 ATG14Q6ZNE5 492 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 GSTA5Q7RTV2 222 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 C9orf43Q8TAL5 461 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-213ENST00000489045 MAIP1Q8WWC4 291 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 PEX13Q92968 403 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 TWSG1Q9GZX9 223 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 ACTL8Q9H568 366 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 ACTR10Q9NZ32 417 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 KCNMB2Q9Y691 235 aa22.3■■□□□ 1.16
COL9A3-213ENST00000489045 PIPSLA2A3N6 862 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 BHMG1C9JSJ3 638 aaPredicted RBP22.29■■□□□ 1.16
COL9A3-213ENST00000489045 PVRP15151 417 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 BASP1P80723 227 aaKnown RBP22.29■■□□□ 1.16
COL9A3-213ENST00000489045 PLOD1Q02809 727 aaPredicted RBP22.29■■□□□ 1.16
COL9A3-213ENST00000489045 ABRQ12979 859 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 GPS2Q13227 327 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 PRAMEF17Q5VTA0 474 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 TMEM135Q86UB9 458 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 PTRH1Q86Y79 214 aaKnown RBP22.29■■□□□ 1.16
COL9A3-213ENST00000489045 TBC1D21Q8IYX1 336 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 SGSM3Q96HU1 749 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 TRAPPC9Q96Q05 1148 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 KLHL25Q9H0H3 589 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 CHRAC1Q9NRG0 131 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 POLHQ9Y253 713 aa22.29■■□□□ 1.16
COL9A3-213ENST00000489045 TDRKHQ9Y2W6 561 aaKnown RBP22.29■■□□□ 1.16
COL9A3-213ENST00000489045 SETXQ7Z333 2677 aaKnown RBP22.29■■□□□ 1.16
COL9A3-213ENST00000489045 TMEM150CB9EJG8 249 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 F8W8V4 182 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 CEP104O60308 925 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 CXCR5P32302 372 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 SHMT2P34897 504 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 PPARGP37231 505 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-213ENST00000489045 KCNJ1P48048 391 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 CSE1LP55060 971 aaKnown RBP22.28■■□□□ 1.16
COL9A3-213ENST00000489045 RPS18P62269 152 aaKnown RBP22.28■■□□□ 1.16
COL9A3-213ENST00000489045 CRADDP78560 199 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 PCID2Q5JVF3 399 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 SPESP1Q6UW49 350 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 C4orf22Q6V702 233 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 LDB1Q86U70 411 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-213ENST00000489045 SLC38A9Q8NBW4 561 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 OR1L3Q8NH93 324 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 OR5K2Q8NHB8 316 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 LKAAEAR1Q8TD35 194 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 MR1Q95460 341 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 ABHD17AQ96GS6 310 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 SYTL2Q9HCH5 934 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 ZNF71Q9NQZ8 489 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-213ENST00000489045 CATSPERZQ9NTU4 200 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 POLG2Q9UHN1 485 aa22.28■■□□□ 1.16
COL9A3-213ENST00000489045 RECKO95980 971 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 PTPN4P29074 926 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 KCTD19Q17RG1 926 aaPredicted RBP22.27■■□□□ 1.16
COL9A3-213ENST00000489045 ZNF789Q5FWF6 425 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 AARS2Q5JTZ9 985 aaKnown RBP22.27■■□□□ 1.16
COL9A3-213ENST00000489045 UNC5AQ6ZN44 842 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 TRIM73Q86UV7 250 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 CPT1BQ92523 772 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 GPR87Q9BY21 358 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 MARCH4Q9P2E8 410 aaPredicted RBP22.27■■□□□ 1.16
COL9A3-213ENST00000489045 ANAPC5Q9UJX4 755 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 PLAGL1Q9UM63 463 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 PPP2R2CQ9Y2T4 447 aa22.27■■□□□ 1.16
COL9A3-213ENST00000489045 MAP3K7O43318 606 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 MSL3P1P0C860 447 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 TPBGLP0DKB5 382 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 UGT2B7P16662 529 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 CCR7P32248 378 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 RPS15P62841 145 aaKnown RBP22.26■■□□□ 1.15
COL9A3-213ENST00000489045 ZNF517Q6ZMY9 492 aaPredicted RBP22.26■■□□□ 1.15
COL9A3-213ENST00000489045 HOOK3Q86VS8 718 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 CLIP3Q96DZ5 547 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 LRFN5Q96NI6 719 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms