RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LOC105371242A0A075B767 164 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 TMEM8BA6NDV4 472 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 PI4K2BG5E9Z4 385 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 KRT6AP02538 564 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 KRT6BP04259 564 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 HIST1H2ABP04908 130 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 MGMTP16455 207 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 HIST1H2ADP20671 130 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 OXTRP30559 389 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 MSH2P43246 934 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 KRT6CP48668 564 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 RARSP54136 660 aaKnown RBP2.02□□□□□ -2.09
CCDC93-209ENST00000488908 FCHO2Q0JRZ9 810 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 LINGO4Q6UY18 593 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 HIST3H2AQ7L7L0 130 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 LRRTM4Q86VH4 590 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 PPFIBP2Q8ND30 876 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 NPRL2Q8WTW4 380 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 FAM149B1Q96BN6 582 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 ZNF486Q96H40 463 aaPredicted RBP2.02□□□□□ -2.09
CCDC93-209ENST00000488908 NR1H4Q96RI1 486 aaPredicted RBP2.02□□□□□ -2.09
CCDC93-209ENST00000488908 NUDCD1Q96RS6 583 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 MAP7D2Q96T17 732 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 ABHD6Q9BV23 337 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 CSNK1G3Q9Y6M4 447 aa2.02□□□□□ -2.09
CCDC93-209ENST00000488908 ARHGEF40Q8TER5 1519 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 FAM220BPB1ANY3 271 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 SHISA9B4DS77 424 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 H0Y9J4 135 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 SLCO2B1O94956 709 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 TSFMP43897 325 aaKnown RBP2.01□□□□□ -2.09
CCDC93-209ENST00000488908 GUCY2DQ02846 1103 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 CD300CQ08708 224 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 CSTF3Q12996 717 aaKnown RBP2.01□□□□□ -2.09
CCDC93-209ENST00000488908 PLA2G7Q13093 441 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 CCNG2Q16589 344 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 C20orf194Q5TEA3 1177 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 OLFML2AQ68BL7 652 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 SLC25A47Q6Q0C1 308 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 FRRS1Q6ZNA5 592 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 GPRC5AQ8NFJ5 357 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 MYRIPQ8NFW9 859 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 TRIM63Q969Q1 353 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 FNBP1Q96RU3 617 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 TUBB1Q9H4B7 451 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 MAN2C1Q9NTJ4 1040 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 OR6C2Q9NZP2 312 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 OSGIN1Q9UJX0 560 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 SLC6A5Q9Y345 797 aa2.01□□□□□ -2.09
CCDC93-209ENST00000488908 UMODL1Q5DID0 1318 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 A0A1W2PR80 420 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 ZNF840PA6NDX5 716 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 PLEKHD1A6NEE1 506 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 TFECO14948 347 aaPredicted RBP2□□□□□ -2.09
CCDC93-209ENST00000488908 HCRTR2O43614 444 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 GALR3O60755 368 aaPredicted RBP2□□□□□ -2.09
CCDC93-209ENST00000488908 NDUFS3O75489 264 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 SEC14L2O76054 403 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 CCNDBP1O95273 360 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 F9P00740 461 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 IGHEP01854 428 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 LHCGRP22888 699 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 HLA-FP30511 346 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 GPR143P51810 404 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 B3GALT5-AS1P59052 145 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 VAMP2P63027 116 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 OLR1P78380 273 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 CX3CL1P78423 397 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 TLE2Q04725 743 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 RHOXF1Q8NHV9 184 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 MTERF3Q96E29 417 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 SERAC1Q96JX3 654 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 UBXN10Q96LJ8 280 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 SLC22A12Q96S37 553 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 MGME1Q9BQP7 344 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 ISCA1Q9BUE6 129 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 SCPEP1Q9HB40 452 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 PPANQ9NQ55 473 aaKnown RBP2□□□□□ -2.09
CCDC93-209ENST00000488908 PCDHB16Q9NRJ7 776 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 NPAP1Q9NZP6 1156 aa2□□□□□ -2.09
CCDC93-209ENST00000488908 TRIM49BA6NDI0 452 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 HAT1O14929 419 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 SEC24AO95486 1093 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 POP4O95707 220 aaKnown RBP1.99□□□□□ -2.09
CCDC93-209ENST00000488908 IGHV4-31P0DP07 118 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 FDPSP14324 419 aaKnown RBP1.99□□□□□ -2.09
CCDC93-209ENST00000488908 ACADLP28330 430 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 ETV5P41161 510 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 TRAPPC10P48553 1259 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 LMAN1P49257 510 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 PDLIM3Q53GG5 364 aaPredicted RBP1.99□□□□□ -2.09
CCDC93-209ENST00000488908 GDPGP1Q6ZNW5 385 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 CDHR3Q6ZTQ4 885 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 CCDC146Q8IYE0 955 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 SAMD3Q8N6K7 520 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 C11orf45Q8TAV5 145 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 RNF128Q8TEB7 428 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 INTS12Q96CB8 462 aaKnown RBP1.99□□□□□ -2.09
CCDC93-209ENST00000488908 RNF125Q96EQ8 232 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 MAELQ96JY0 434 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms