RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 SOHLH2Q9NX45 425 aa10.88□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SMARCAL1Q9NZC9 954 aa10.88□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PADI1Q9ULC6 663 aa10.88□□□□□ -0.67
RAB11FIP3-210ENST00000487899 RIMKLBQ9ULI2 386 aa10.88□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TCAF1Q9Y4C2 921 aa10.88□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SLC5A10A0PJK1 596 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 BHMG1C9JSJ3 638 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 H3BMH7 237 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 K7EM74 188 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 IFRD1O00458 451 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 WISP1O95388 367 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 GOT2P00505 430 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ZSCAN5DPP0CG00 497 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 NR1D1P20393 614 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CDH3P22223 829 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PRDX3P30048 256 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 STIP1P31948 543 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 FDFT1P37268 417 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 LMAN1P49257 510 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ARL4DP49703 201 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PMS2P54278 862 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 GSDMDP57764 484 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CCZ1BP86790 482 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TLE1Q04724 770 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PRKG2Q13237 762 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SNX1Q13596 522 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 KCTD19Q17RG1 926 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SKIDA1Q1XH10 827 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CPZQ66K79 652 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ARMC6Q6NXE6 501 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SPESP1Q6UW49 350 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TRIM73Q86UV7 250 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 AMIGO1Q86WK6 493 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 DNAAF3Q8N9W5 541 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 OR8K5Q8NH50 307 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 OR1L3Q8NH93 324 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ELMO1Q92556 727 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TFGQ92734 400 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 HDAC10Q969S8 669 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ABHD17AQ96GS6 310 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 LRFN5Q96NI6 719 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TRAPPC9Q96Q05 1148 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 FERD3LQ96RJ6 166 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 KLHL25Q9H0H3 589 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CLMPQ9H6B4 373 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 EIF2B3Q9NR50 452 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ACTR10Q9NZ32 417 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 MARCH4Q9P2E8 410 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 KCND3Q9UK17 655 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ZNF148Q9UQR1 794 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CDYLQ9Y232 598 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 POLHQ9Y253 713 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TP53TG5Q9Y2B4 290 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 DOCK10Q96BY6 2186 aa10.87□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CDC14CA4D256 554 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TMEM150CB9EJG8 249 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 QSOX1O00391 747 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 HCRTR1O43613 425 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 KATNA1O75449 491 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 DNAJB5O75953 348 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 FTH1P02794 183 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CAPN1P07384 714 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 APRTP07741 180 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PEBP1P30086 187 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 RPL22P35268 128 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 GABRA4P48169 554 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CSRP3P50461 194 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CRADDP78560 199 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PRKAA1Q13131 559 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 KRT33BQ14525 404 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 UGT8Q16880 541 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SYTL3Q4VX76 610 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 LACTB2Q53H82 288 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 FAM69BQ5VUD6 431 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 IZUMO3Q5VZ72 239 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ZNF385CQ66K41 422 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 LCN10Q6JVE6 187 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 DRICH1Q6PGQ1 229 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PPP1R21Q6ZMI0 780 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ZNF662Q6ZS27 426 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CDHR3Q6ZTQ4 885 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 VRK3Q8IV63 474 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 DSELQ8IZU8 1212 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 OR5K2Q8NHB8 316 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ADAMTS17Q8TE56 1095 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PEX13Q92968 403 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SGSM3Q96HU1 749 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 MENTQ9BUN1 341 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TRIM55Q9BYV6 548 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 CHST8Q9H2A9 424 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 LZTFL1Q9NQ48 299 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 ZNF71Q9NQZ8 489 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 KCND1Q9NSA2 647 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 TREX1Q9NSU2 369 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PCMTD2Q9NV79 361 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 SPHK1Q9NYA1 384 aa10.86□□□□□ -0.67
RAB11FIP3-210ENST00000487899 PAK5Q9P286 719 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms