RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PPP2R3CQ969Q6 453 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 ELMO2Q96JJ3 720 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 MEGF10Q96KG7 1140 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 TMEM68Q96MH6 324 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 NECTIN4Q96NY8 510 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 CD180Q99467 661 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 PAFAH2Q99487 392 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 UPF3AQ9H1J1 476 aaKnown RBP5.43□□□□□ -1.54
SF1-217ENST00000486960 CDT1Q9H211 546 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 RPF1Q9H9Y2 349 aaKnown RBP5.43□□□□□ -1.54
SF1-217ENST00000486960 PIH1D3Q9NQM4 214 aaKnown RBP5.43□□□□□ -1.54
SF1-217ENST00000486960 C8orf4Q9NR00 106 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 CHRAC1Q9NRG0 131 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 PANK4Q9NVE7 773 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 ALKBH4Q9NXW9 302 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 OGFRQ9NZT2 677 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 STK17AQ9UEE5 414 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 SCOCQ9UIL1 159 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 TTC7AQ9ULT0 858 aaPredicted RBP5.43□□□□□ -1.54
SF1-217ENST00000486960 CNTN6Q9UQ52 1028 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 SLC22A14Q9Y267 594 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 TELO2Q9Y4R8 837 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 RNF215Q9Y6U7 377 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 UBE4BO95155 1302 aa5.43□□□□□ -1.54
SF1-217ENST00000486960 MYH7BA7E2Y1 1941 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 A0A087WV48 116 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 TMEM120BA0PK00 339 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 TTC24A2A3L6 582 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 HELTA6NFD8 242 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 SH2D7A6NKC9 451 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 LRRC53A6NM62 1247 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 PDLIM1O00151 329 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 HS3ST1O14792 307 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 RAD51BO15315 384 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 AKR7A2O43488 359 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 AVILO75366 819 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 FRAT2O75474 233 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 CDC123O75794 336 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 CLPXO76031 633 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 LY86O95711 162 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 ABHD16AO95870 558 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 GHRHP01286 108 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 AHSGP02765 367 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 ITGB3P05106 788 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 CD3EP07766 207 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 FAM58BPP0C7Q3 252 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 OR8G3PP0DMU2 310 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 COX7A2P14406 83 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 IDO1P14902 403 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 VCLP18206 1134 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 PTNP21246 168 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 IL32P24001 234 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 YWHAQP27348 245 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 CDC25CP30307 473 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 SLC6A11P48066 632 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 PREPP48147 710 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 TUFMP49411 452 aaKnown RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 BACE1P56817 501 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 GSTM4Q03013 218 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 PTH1RQ03431 593 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 LSAMPQ13449 338 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 DYRK1AQ13627 763 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 SLC29A2Q14542 456 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 NONOQ15233 471 aaKnown RBP eCLIP5.42□□□□□ -1.54
SF1-217ENST00000486960 USF2Q15853 346 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 USH1GQ495M9 461 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 TMEM119Q4V9L6 283 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 IFI44LQ53G44 452 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 PLA1AQ53H76 456 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 FIGNQ5HY92 759 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 ZNF311Q5JNZ3 666 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 THEM4Q5T1C6 240 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 CARD17Q5XLA6 110 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 ZNF385CQ66K41 422 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 C18orf63Q68DL7 685 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 SLC9A4Q6AI14 798 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 CLEC6AQ6EIG7 209 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 KIAA1161Q6NSJ0 714 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 WDR88Q6ZMY6 472 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.42□□□□□ -1.54
SF1-217ENST00000486960 Q6ZNB5 142 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 ASPGQ86U10 573 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 FAM131BQ86XD5 332 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 IRF2BP1Q8IU81 584 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 LYSMD2Q8IV50 215 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 SERPINA12Q8IW75 414 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 TIGD4Q8IY51 512 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 GHDCQ8N2G8 530 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 NECAB1Q8N987 351 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 OR2T3Q8NH03 318 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 OR56A3Q8NH54 315 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 FEZF2Q8TBJ5 459 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 HMGB4Q8WW32 186 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 TCP11Q8WWU5 503 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 DNASE1L2Q92874 299 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 KIAA1143Q96AT1 154 aaPredicted RBP5.42□□□□□ -1.54
SF1-217ENST00000486960 KLHL29Q96CT2 875 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 MRGPRX4Q96LA9 322 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 C5orf34Q96MH7 638 aa5.42□□□□□ -1.54
SF1-217ENST00000486960 ZSWIM3Q96MP5 696 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms