RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RAD51AP1Q96B01 352 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SLC22A18Q96BI1 424 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ELMO2Q96JJ3 720 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 OR52A5Q9H2C5 316 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 LRRN3Q9H3W5 708 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SRMSQ9H3Y6 488 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ACSS3Q9H6R3 686 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 KIR3DX1Q9H7L2 352 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SYNDIG1Q9H7V2 258 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 TLK1Q9UKI8 766 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 SLC39A10Q9ULF5 831 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 RAXQ9Y2V3 346 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 PRSS21Q9Y6M0 314 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 TP53BP1Q12888 1972 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-208ENST00000485618 NBEAQ8NFP9 2946 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 PIKFYVEQ9Y2I7 2098 aa8.07□□□□□ -1.12
SF3A1-208ENST00000485618 ADAMTS20P59510 1910 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 EXOC1LA0A1B0GW35 172 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 PRR19A6NJB7 356 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 IQCF5A8MTL0 148 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 SLC16A5O15375 505 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 NIPSNAP2O75323 286 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 UBXN7O94888 489 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CAPNS1P04632 268 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 RPLP0P05388 317 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 C8GP07360 202 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 MPC1LP0DKB6 136 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 BRAFP15056 766 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 STMN1P16949 149 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CYP2A7P20853 494 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 SAT1P21673 171 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CLCN7P51798 805 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 OR1D5P58170 312 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 GPX6P59796 221 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 TRA2AQ13595 282 aaKnown RBP eCLIP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CLCA4Q14CN2 919 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 NAA25Q14CX7 972 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 SMAD1Q15797 465 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 UAP1Q16222 522 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 AMZ1Q400G9 498 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 HECTD2Q5U5R9 776 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 RAPH1Q70E73 1250 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 SLCO6A1Q86UG4 719 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 ZC3HC1Q86WB0 502 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 DCUN1D3Q8IWE4 304 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 UNC5BQ8IZJ1 945 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CARFQ8N187 725 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 KRT222Q8N1A0 295 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CFAP61Q8NHU2 1237 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 MCOLN3Q8TDD5 553 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 NCSTNQ92542 709 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 MTBPQ96DY7 904 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 TSNARE1Q96NA8 513 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CD180Q99467 661 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 GPR21Q99679 349 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CDC42EP4Q9H3Q1 356 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 TFB2MQ9H5Q4 396 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 UTP6Q9NYH9 597 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 NINJ2Q9NZG7 142 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 OR6C2Q9NZP2 312 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 ZNF624Q9P2J8 865 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 FETUBQ9UGM5 382 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 RABGEF1Q9UJ41 708 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 CLCA2Q9UQC9 943 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 WDR37Q9Y2I8 494 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 TDRKHQ9Y2W6 561 aaKnown RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 PCYT1BQ9Y5K3 369 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-208ENST00000485618 ENTPD2Q9Y5L3 495 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 ST14Q9Y5Y6 855 aa8.06□□□□□ -1.12
SF3A1-208ENST00000485618 ZFC3H1O60293 1989 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 FAM95CA0A1B0GW59 222 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 CCDC189A1A4V9 331 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 EIF4E1BA6NMX2 242 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 PPM1DO15297 605 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 TOX3O15405 576 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 EML2O95834 649 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 MT-CO3P00414 261 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 MYF5P13349 255 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ACADLP28330 430 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 PDHA2P29803 388 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ECHS1P30084 290 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 SLC26A3P40879 764 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ARL4DP49703 201 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 LIMK2P53671 638 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 INHBCP55103 352 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 RAB10P61026 200 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ATP6V0D1P61421 351 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 CCL7P80098 99 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 EIF3IQ13347 325 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 GPR18Q14330 331 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ARHGAP19Q14CB8 494 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 SOWAHCQ53LP3 525 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 TAF1BQ53T94 588 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ZNF789Q5FWF6 425 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 CTSL3PQ5NE16 218 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 KLC3Q6P597 504 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 TMEM71Q6P5X7 295 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ZNF549Q6P9A3 640 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms