RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 GAGE6Q13070 117 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 NR1D2Q14995 579 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.33□□□□□ -1.4
UBR3-210ENST00000484596 ADCK2Q7Z695 626 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 CEP57Q86XR8 500 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 CAMKVQ8NCB2 501 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 OR52I2Q8NH67 350 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 ARSGQ96EG1 525 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 LMLNQ96KR4 655 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 LRRC1Q9BTT6 524 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 CSTL1Q9H114 145 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 PPIL3Q9H2H8 161 aaKnown RBP6.33□□□□□ -1.4
UBR3-210ENST00000484596 PIH1D3Q9NQM4 214 aaKnown RBP6.33□□□□□ -1.4
UBR3-210ENST00000484596 IL17BQ9UHF5 180 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 POMT1Q9Y6A1 747 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 ADGRL1O94910 1474 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 SIGLEC1Q9BZZ2 1709 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 TNIKQ9UKE5 1360 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 HECW2Q9P2P5 1572 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 RPGRIP1LQ68CZ1 1315 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 TMEM178BH3BS89 294 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 TULP2O00295 520 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 PLK4O00444 970 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 SSX4O60224 188 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 PTMSP20962 102 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 DNASE1P24855 282 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 ARCN1P48444 511 aaKnown RBP6.32□□□□□ -1.4
UBR3-210ENST00000484596 GAS1P54826 345 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 MELKQ14680 651 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 ASPRV1Q53RT3 343 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 WBP2NLQ6ICG8 309 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 Q6ZTC4 211 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 CCDC91Q7Z6B0 441 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 CENPVQ7Z7K6 275 aaPredicted RBP6.32□□□□□ -1.4
UBR3-210ENST00000484596 FBXO39Q8N4B4 442 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 AFAP1Q8N556 730 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 METTL27Q8N6F8 245 aaPredicted RBP6.32□□□□□ -1.4
UBR3-210ENST00000484596 IQUBQ8NA54 791 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 MSANTD4Q8NCY6 345 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 PAPD5Q8NDF8 572 aaKnown RBP6.32□□□□□ -1.4
UBR3-210ENST00000484596 ANKZF1Q9H8Y5 726 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 KLHL9Q9P2J3 617 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 SNX5Q9Y5X3 404 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 PLB1Q6P1J6 1458 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 PTPRGP23470 1445 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 UACAQ9BZF9 1416 aa6.32□□□□□ -1.4
UBR3-210ENST00000484596 SAMD9Q5K651 1589 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 FRMPD1Q5SYB0 1578 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 PRAC2D3DTV9 90 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 PDE9AO76083 593 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 LDLRP01130 860 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 PENKP01210 267 aaPredicted RBP6.31□□□□□ -1.4
UBR3-210ENST00000484596 PFKFB1P16118 471 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 SP100P23497 879 aaPredicted RBP6.31□□□□□ -1.4
UBR3-210ENST00000484596 FUT6P51993 359 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 RUNX1T1Q06455 604 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 PDSS1Q5T2R2 415 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 FAM171BQ6P995 826 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 TEX38Q6PEX7 206 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 SMPDL3BQ92485 455 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 ERLEC1Q96DZ1 483 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 SPACA9Q96E40 222 aaPredicted RBP6.31□□□□□ -1.4
UBR3-210ENST00000484596 VPS33BQ9H267 617 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 SEMA6AQ9H2E6 1030 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 RETREG1Q9H6L5 497 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 NOL11Q9H8H0 719 aaKnown RBP6.31□□□□□ -1.4
UBR3-210ENST00000484596 CNOT10Q9H9A5 744 aaKnown RBP6.31□□□□□ -1.4
UBR3-210ENST00000484596 COPS7BQ9H9Q2 264 aaPredicted RBP6.31□□□□□ -1.4
UBR3-210ENST00000484596 HHATLQ9HCP6 504 aa6.31□□□□□ -1.4
UBR3-210ENST00000484596 RAPGEF2Q9Y4G8 1499 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 SYNCRIPO60506 623 aaKnown RBP6.3□□□□□ -1.4
UBR3-210ENST00000484596 TSPAN1O60635 241 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 ATP6V1B1P15313 513 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 DGKAP23743 735 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 HOXC13P31276 330 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 HOXA1P49639 335 aaPredicted RBP6.3□□□□□ -1.4
UBR3-210ENST00000484596 ZNF132P52740 706 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 E2F5Q15329 346 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 MPP7Q5T2T1 576 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 GCNT6Q5T4J0 391 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 KRT39Q6A163 491 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 PACS1Q6VY07 963 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 CCDC170Q8IYT3 715 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 NUP93Q8N1F7 819 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 TMCO5AQ8N6Q1 288 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 POC1AQ8NBT0 407 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 LINGO1Q96FE5 620 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 MGME1Q9BQP7 344 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 MRPL9Q9BYD2 267 aaKnown RBP6.3□□□□□ -1.4
UBR3-210ENST00000484596 MTRRQ9UBK8 725 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 DNAJB9Q9UBS3 223 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 LIPGQ9Y5X9 500 aa6.3□□□□□ -1.4
UBR3-210ENST00000484596 ABCA9Q8IUA7 1624 aa6.29□□□□□ -1.4
UBR3-210ENST00000484596 CTAGE9A4FU28 777 aa6.29□□□□□ -1.4
UBR3-210ENST00000484596 TRIM64A6NGJ6 449 aa6.29□□□□□ -1.4
UBR3-210ENST00000484596 TRIM64BA6NI03 449 aa6.29□□□□□ -1.4
UBR3-210ENST00000484596 SYNGR3O43761 229 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms