RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PVRP15151 417 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 TCP1P17987 556 aaKnown RBP11.92□□□□□ -0.5
MSH5-216ENST00000484309 ACADLP28330 430 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 RHDQ02161 417 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 ABRQ12979 859 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 LY6DQ14210 128 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 CTSL3PQ5NE16 218 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 KIAA0930Q6ICG6 404 aaPredicted RBP11.92□□□□□ -0.5
MSH5-216ENST00000484309 TRIM73Q86UV7 250 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 AMIGO1Q86WK6 493 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 AGGF1Q8N302 714 aaeCLIP11.92□□□□□ -0.5
MSH5-216ENST00000484309 LMNTD1Q8N9Z9 388 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 SNRNP27Q8WVK2 155 aaKnown RBP11.92□□□□□ -0.5
MSH5-216ENST00000484309 TTC9Q92623 222 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 SGSM3Q96HU1 749 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 CD180Q99467 661 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 CARD6Q9BX69 1037 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 TSSK1BQ9BXA7 367 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 P2RY12Q9H244 342 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 TRIT1Q9H3H1 467 aaKnown RBP11.92□□□□□ -0.5
MSH5-216ENST00000484309 SAMD15Q9P1V8 674 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 SEMA5BQ9P283 1151 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 ASIC3Q9UHC3 531 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 GNPTGQ9UJJ9 305 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 RARRES3Q9UL19 164 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 CDYLQ9Y232 598 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 F8W8V4 182 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ERVH48-1M5A8F1 160 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 NIPSNAP2O75323 286 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 BANF1O75531 89 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 SPAG6O75602 509 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ZBTB11O95625 1053 aaPredicted RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 APOA4P06727 396 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 TPBGLP0DKB5 382 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 FGF5P12034 268 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ST6GAL1P15907 406 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 PRDX3P30048 256 aaKnown RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 FMO4P31512 558 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 HSD11B2P80365 405 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 DHX34Q14147 1143 aaKnown RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 IL11RAQ14626 422 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 TMED2Q15363 201 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ZNF789Q5FWF6 425 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 PWWP2BQ6NUJ5 590 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 PPP1R3BQ86XI6 285 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 TBC1D21Q8IYX1 336 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 SLC22A15Q8IZD6 547 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ADGRF3Q8IZF5 1079 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 C17orf53Q8N3J3 647 aaPredicted RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 NAT8LQ8N9F0 302 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 MCUQ8NE86 351 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 LPGAT1Q92604 370 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 EXTL1Q92935 676 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 STAMBPL1Q96FJ0 436 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 NAPGQ99747 312 aaPredicted RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 TFB2MQ9H5Q4 396 aaKnown RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 GPN2Q9H9Y4 310 aaPredicted RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 XAB2Q9HCS7 855 aaKnown RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 PDE7BQ9NP56 450 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 FGF21Q9NSA1 209 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ACTR10Q9NZ32 417 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 IL17BQ9UHF5 180 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 CRYL1Q9Y2S2 319 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 MRPS18BQ9Y676 258 aaKnown RBP11.91□□□□□ -0.5
MSH5-216ENST00000484309 MAD1L1Q9Y6D9 718 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 RPS6KL1Q9Y6S9 549 aa11.91□□□□□ -0.5
MSH5-216ENST00000484309 ATMQ13315 3056 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 KRT87PA6NCN2 255 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SDR42E2A6NKP2 422 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 C2orf74A8MZ97 194 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SEC16AO15027 2179 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 FANCGO15287 622 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 GPC4O75487 556 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 NTRK1P04629 796 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 MLNP12872 115 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 PAMP19021 973 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 RPS3P23396 243 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-216ENST00000484309 MAP4P27816 1152 aaKnown RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 AOAHP28039 575 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SHMT2P34897 504 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 PTGIRP43119 386 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 BDKRB1P46663 353 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 PLOD1Q02809 727 aaPredicted RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 ACY1Q03154 408 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 PTK6Q13882 451 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 COL9A2Q14055 689 aaPredicted RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 TYSND1Q2T9J0 566 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-216ENST00000484309 ANKRD20A4Q4UJ75 823 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 TMTC4Q5T4D3 741 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 RNASEH2BQ5TBB1 312 aaKnown RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 ZNF470Q6ECI4 717 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 MRNIPQ6NTE8 343 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 C6orf15Q6UXA7 325 aaPredicted RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 UNC5AQ6ZN44 842 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SDCCAG8Q86SQ7 713 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms