RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 LMNTD1Q8N9Z9 388 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 ZFPM2Q8WW38 1151 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 MR1Q95460 341 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 ZNF501Q96CX3 271 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-212ENST00000482251 RANBP9Q96S59 729 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 TWSG1Q9GZX9 223 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 ACTL8Q9H568 366 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 MVB12BQ9H7P6 319 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 CHRAC1Q9NRG0 131 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 ACTR10Q9NZ32 417 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 MARCH4Q9P2E8 410 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-212ENST00000482251 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
CPSF4-212ENST00000482251 PADI1Q9ULC6 663 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 TTC7AQ9ULT0 858 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-212ENST00000482251 BTRCQ9Y297 605 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
CPSF4-212ENST00000482251 PIPSLA2A3N6 862 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 C2orf74A8MZ97 194 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-212ENST00000482251 DNAJB5O75953 348 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 MT-ND3P03897 115 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 SFTPCP11686 197 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 UGT2B7P16662 529 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 PSMA3P25788 255 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 PRDX3P30048 256 aaKnown RBP10.15□□□□□ -0.78
CPSF4-212ENST00000482251 CD151P48509 253 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 HSPA14Q0VDF9 509 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 RPA4Q13156 261 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 IL10RAQ13651 578 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 CCNG2Q16589 344 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 FASTKD1Q53R41 847 aaKnown RBP10.15□□□□□ -0.78
CPSF4-212ENST00000482251 CES3Q6UWW8 571 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 TAX1BP1Q86VP1 789 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 VRK3Q8IV63 474 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 FAM20CQ8IXL6 584 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 ADGRF3Q8IZF5 1079 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 SLC38A9Q8NBW4 561 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 TRIM58Q8NG06 486 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 OR4L1Q8NH43 312 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 OR1L3Q8NH93 324 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 CFAP61Q8NHU2 1237 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 C9orf43Q8TAL5 461 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-212ENST00000482251 APOBEC4Q8WW27 367 aaKnown RBP10.15□□□□□ -0.78
CPSF4-212ENST00000482251 ADNPQ9H2P0 1102 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 TFB2MQ9H5Q4 396 aaKnown RBP10.15□□□□□ -0.78
CPSF4-212ENST00000482251 FANCEQ9HB96 536 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 C1GALT1Q9NS00 363 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 KCND1Q9NSA2 647 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 CATSPERZQ9NTU4 200 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 SYBUQ9NX95 663 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 SPHK1Q9NYA1 384 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 PPP2R2CQ9Y2T4 447 aa10.15□□□□□ -0.78
CPSF4-212ENST00000482251 TCRBV7S3A2A0A539 114 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 SLC5A10A0PJK1 596 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 KRT87PA6NCN2 255 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 GOLGA8KD6RF30 607 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 GOLGA8TH3BQL2 631 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 MATN2O00339 956 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 QSOX1O00391 747 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CREG1O75629 220 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CHRM5P08912 532 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-212ENST00000482251 GSTM1P09488 218 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 TPBGLP0DKB5 382 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CYP2A7P20853 494 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 MGAT1P26572 445 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 ACADLP28330 430 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 NMBRP28336 390 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CCR7P32248 378 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 GSTM4Q03013 218 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 ACVR1Q04771 509 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CHAF1BQ13112 559 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 PTCHD3Q3KNS1 767 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CPZQ66K79 652 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 LCN10Q6JVE6 187 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 SPESP1Q6UW49 350 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 UNC5AQ6ZN44 842 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 ATG14Q6ZNE5 492 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CDHR3Q6ZTQ4 885 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 HOOK3Q86VS8 718 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 C2orf73Q8N5S3 287 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-212ENST00000482251 C19orf47Q8N9M1 422 aaKnown RBP10.14□□□□□ -0.79
CPSF4-212ENST00000482251 FAM136AQ96C01 138 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CLIP3Q96DZ5 547 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 TRAPPC9Q96Q05 1148 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 TTC1Q99614 292 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 PITPNM3Q9BZ71 974 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 SLC7A5P2Q9GIP4 190 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 CHST8Q9H2A9 424 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 EIF2B3Q9NR50 452 aaKnown RBP10.14□□□□□ -0.79
CPSF4-212ENST00000482251 ANAPC5Q9UJX4 755 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 KCND3Q9UK17 655 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 RUVBL2Q9Y230 463 aaKnown RBP10.14□□□□□ -0.79
CPSF4-212ENST00000482251 POLHQ9Y253 713 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 TP53TG5Q9Y2B4 290 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 MAN2B2Q9Y2E5 1009 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 KCNMB2Q9Y691 235 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 TLN1Q9Y490 2541 aaKnown RBP10.14□□□□□ -0.79
CPSF4-212ENST00000482251 SPTA1P02549 2419 aa10.14□□□□□ -0.79
CPSF4-212ENST00000482251 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms