RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 RAB40ALP0C0E4 278 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ZSCAN5DPP0CG00 497 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 PRKAR1AP10644 381 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ST6GAL1P15907 406 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 PTPN4P29074 926 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 DEKP35659 375 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 MAGEA6P43360 314 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 PREPP48147 710 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ARCN1P48444 511 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 NFKB2Q00653 900 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 GPS2Q13227 327 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 SEPT6Q14141 434 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 KRT33BQ14525 404 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 SEMA3AQ14563 771 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 GPR19Q15760 415 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 UGT8Q16880 541 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 TMTC4Q5T4D3 741 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 SEL1L2Q5TEA6 688 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ARMC3Q5W041 872 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ZNF385CQ66K41 422 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ZNF449Q6P9G9 518 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 FBXO38Q6PIJ6 1188 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 AFTPHQ6ULP2 937 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 TBC1D21Q8IYX1 336 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 SLC22A15Q8IZD6 547 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 TAB3Q8N5C8 712 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 DNAAF3Q8N9W5 541 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 OR4L1Q8NH43 312 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ADAMTS17Q8TE56 1095 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 SEC14L1Q92503 715 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ABHD17AQ96GS6 310 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ALS2CR12Q96Q35 445 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 CARD6Q9BX69 1037 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 MLXIPLQ9NP71 852 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ENAMQ9NRM1 1142 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ACTR10Q9NZ32 417 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 OR6C2Q9NZP2 312 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 FAM8A1Q9UBU6 413 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 POLG2Q9UHN1 485 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 ICKQ9UPZ9 632 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 POLHQ9Y253 713 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 MED13Q9UHV7 2174 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 UBR5O95071 2799 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 C2orf74A8MZ97 194 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 MEN1O00255 615 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CPNE3O75131 537 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 SCRG1O75711 98 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 GAS8O95995 478 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 APRTP07741 180 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CCDC175P0C221 793 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 OR56A5P0C7T3 313 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ARNTP27540 789 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 AOAHP28039 575 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CCR7P32248 378 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 SHMT2P34897 504 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CASRP41180 1078 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ARL4DP49703 201 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 PMS2P54278 862 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CCZ1BP86790 482 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CCZ1P86791 482 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CDK16Q00536 496 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 KCNC4Q03721 635 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ABRQ12979 859 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 PRKAA1Q13131 559 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 PRKG2Q13237 762 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 SNX1Q13596 522 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ERV3-1Q14264 604 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 GRB7Q14451 532 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ZIC1Q15915 447 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 DNAJC21Q5F1R6 531 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 PCID2Q5JVF3 399 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 LCN10Q6JVE6 187 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 TCTN3Q6NUS6 607 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 C16orf46Q6P387 395 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 FAM199XQ6PEV8 388 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 UNC5AQ6ZN44 842 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CDHR3Q6ZTQ4 885 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 SYVN1Q86TM6 617 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 DSELQ8IZU8 1212 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 PRELID2Q8N945 189 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 OR5AR1Q8NGP9 310 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 OR1L3Q8NH93 324 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 OR5K2Q8NHB8 316 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 C9orf43Q8TAL5 461 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 THAP4Q8WY91 577 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CPT1BQ92523 772 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 OR2A14Q96R47 310 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 RUFY1Q96T51 708 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 TTC1Q99614 292 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 KIFC1Q9BW19 673 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 AP1M1Q9BXS5 423 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CHST8Q9H2A9 424 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CLMPQ9H6B4 373 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 XKR8Q9H6D3 395 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 FAM60AQ9NP50 221 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 CHRAC1Q9NRG0 131 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 PCMTD2Q9NV79 361 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms