RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ADH1CP00326 375 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 CTSCP53634 463 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 APOFQ13790 326 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 NRF1Q16656 503 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 VPS26BQ4G0F5 336 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 NADK2Q4G0N4 442 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 ZNF805Q5CZA5 627 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 VITQ6UXI7 678 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 RBM44Q6ZP01 1051 aaKnown RBP14.15□□□□□ -0.14
CHD3-211ENST00000481999 GPRIN3Q6ZVF9 776 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 ADAMTSL2Q86TH1 951 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 OR2T34Q8NGX1 318 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 OR2T3Q8NH03 318 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 KXD1Q9BQD3 176 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 GPATCH1Q9BRR8 931 aaKnown RBP14.15□□□□□ -0.14
CHD3-211ENST00000481999 PRO3102Q9H379 93 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 IPPKQ9H8X2 491 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 PTTG2Q9NZH5 202 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 HCN2Q9UL51 889 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 NR5A2O00482 541 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 XPAP23025 273 aaPredicted RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 DGKAP23743 735 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 VIPR1P32241 457 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 BMP8BP34820 402 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 POLR2LP62875 67 aaKnown RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 TXNL4AP83876 142 aaKnown RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 GTF2H2Q13888 395 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 DMC1Q14565 340 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 GTF2H2CQ6P1K8 395 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 RTL10Q7L3V2 364 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 LMNTD1Q8N9Z9 388 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 PDLIM5Q96HC4 596 aaKnown RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 TRIM15Q9C019 465 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 DEC1Q9P2X7 70 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 CNOT6Q9ULM6 557 aaKnown RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 C7orf72A4D263 438 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ANGPT2O15123 496 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 HOXC11O43248 304 aaPredicted RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 VPS4BO75351 444 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ATP1B2P14415 290 aaPredicted RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 ATP6V1B1P15313 513 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 CAPN3P20807 821 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 SOX11P35716 441 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 SOX9P48436 509 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 RGS4P49798 205 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 NR1H2P55055 460 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 DLX2Q07687 328 aaPredicted RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 ZNF234Q14588 700 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ACOX1Q15067 660 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 MTX3Q5HYI7 312 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ISLR2Q6UXK2 745 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 METTL25Q8N6Q8 603 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 OR56A4Q8NGH8 313 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ZUFSPQ96AP4 578 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 VPS33AQ96AX1 596 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 RHBDF1Q96CC6 855 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 NMD3Q96D46 503 aaKnown RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 C1QTNF3Q9BXJ4 246 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 FAM126AQ9BYI3 521 aaPredicted RBP14.14□□□□□ -0.15
CHD3-211ENST00000481999 GRIP2Q9C0E4 1043 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ARMC1Q9NVT9 282 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 WWOXQ9NZC7 414 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 NUDT4Q9NZJ9 180 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 ABCD2Q9UBJ2 740 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
CHD3-211ENST00000481999 TBC1D3BA6NDS4 549 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 CLGNO14967 610 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 VILLO15195 856 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 RAD51BO15315 384 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 MATN4O95460 622 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 ELFN1P0C7U0 828 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 LBPP18428 481 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 PBLDP30039 288 aaPredicted RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 MMP12P39900 470 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 PREPP48147 710 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 ST8SIA6P61647 398 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 TRAF3Q13114 568 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 ABRAXAS2Q15018 415 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 CRY1Q16526 586 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHD3-211ENST00000481999 SGO1Q5FBB7 561 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 C9orf64Q5T6V5 341 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 HENMT1Q5T8I9 393 aaKnown RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 LIPIQ6XZB0 460 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 Q6ZSR9 355 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 MMAAQ8IVH4 418 aaKnown RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 MINDY1Q8N5J2 469 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 METTL6Q8TCB7 284 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 ARRDC3Q96B67 414 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 PPWD1Q96BP3 646 aaKnown RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 MTFMTQ96DP5 389 aaKnown RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 SFXN1Q9H9B4 322 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 SDR39U1Q9NRG7 319 aaPredicted RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 ZNHIT2Q9UHR6 403 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 PTBP2Q9UKA9 531 aaKnown RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 PDE10AQ9Y233 779 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 OARD1Q9Y530 152 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 IGLV3-16A0A075B6K0 115 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms