RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CHAF1BQ13112 559 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 ZNF789Q5FWF6 425 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 SEL1L2Q5TEA6 688 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 CPZQ66K79 652 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 ZNF449Q6P9G9 518 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 PPP1R21Q6ZMI0 780 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 TRIM73Q86UV7 250 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 GLIS1Q8NBF1 620 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 HDAC10Q969S8 669 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 ZNF778Q96MU6 729 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 TRAPPC9Q96Q05 1148 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 GPR87Q9BY21 358 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 LATS2Q9NRM7 1088 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 ACTR10Q9NZ32 417 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 ZNF148Q9UQR1 794 aa17.99■□□□□ 0.47
CLK1-211ENST00000481641 SEC16AO15027 2179 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 CYSRT1A8MQ03 144 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 MEN1O00255 615 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 MATN2O00339 956 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 RECKO95980 971 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 GOT2P00505 430 aaKnown RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 PDGFAP04085 211 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 TPBGLP0DKB5 382 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 ACADLP28330 430 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 STIP1P31948 543 aaKnown RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 CSE1LP55060 971 aaKnown RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 SEMA5AQ13591 1074 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 ITIH4Q14624 930 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 UGT8Q16880 541 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 ZNF517Q6ZMY9 492 aaPredicted RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 SLC13A5Q86YT5 568 aaPredicted RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 DSELQ8IZU8 1212 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 RNF10Q8N5U6 811 aaKnown RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 CLIP3Q96DZ5 547 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 PITPNM3Q9BZ71 974 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 FANCEQ9HB96 536 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 PLAGL1Q9UM63 463 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 ASF1AQ9Y294 204 aa17.98■□□□□ 0.47
CLK1-211ENST00000481641 TDRKHQ9Y2W6 561 aaKnown RBP17.98■□□□□ 0.47
CLK1-211ENST00000481641 FLNCQ14315 2725 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 COL12A1Q99715 3063 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 C2orf74A8MZ97 194 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 BHMG1C9JSJ3 638 aaPredicted RBP17.97■□□□□ 0.47
CLK1-211ENST00000481641 LIN7AO14910 233 aaPredicted RBP17.97■□□□□ 0.47
CLK1-211ENST00000481641 SUN1O94901 812 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 FTH1P02794 183 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 KLK3P07288 261 aaPredicted RBP17.97■□□□□ 0.47
CLK1-211ENST00000481641 ZSCAN5DPP0CG00 497 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 RORAP35398 523 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 FDFT1P37268 417 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 KLRB1Q12918 225 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 SEMA3AQ14563 771 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 KCTD19Q17RG1 926 aaPredicted RBP17.97■□□□□ 0.47
CLK1-211ENST00000481641 PTCHD3Q3KNS1 767 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 TSTD2Q5T7W7 516 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 TCTN3Q6NUS6 607 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 PACS1Q6VY07 963 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 UNC5AQ6ZN44 842 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 CDHR3Q6ZTQ4 885 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 ASB18Q6ZVZ8 466 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 SYVN1Q86TM6 617 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 ENDOVQ8N8Q3 282 aaKnown RBP17.97■□□□□ 0.47
CLK1-211ENST00000481641 CPT1BQ92523 772 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 ACTR5Q9H9F9 607 aaPredicted RBP17.97■□□□□ 0.47
CLK1-211ENST00000481641 FAM60AQ9NP50 221 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 RAB6BQ9NRW1 208 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 PCMTD2Q9NV79 361 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 SPHK1Q9NYA1 384 aa17.97■□□□□ 0.47
CLK1-211ENST00000481641 SLC5A10A0PJK1 596 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 HEATR9A2RTY3 570 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 ARGFXA6NJG6 315 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 ERI2A8K979 691 aaKnown RBP17.96■□□□□ 0.47
CLK1-211ENST00000481641 E7EVH7 732 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 HCRTR1O43613 425 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 GSTM1P09488 218 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 UGT2B7P16662 529 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 CYP2A7P20853 494 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 GSDMDP57764 484 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 FOXK1P85037 733 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 GSTM4Q03013 218 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 ZIC1Q15915 447 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 IZUMO3Q5VZ72 239 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 SPESP1Q6UW49 350 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 ZNF534Q76KX8 674 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 LDB1Q86U70 411 aaPredicted RBP17.96■□□□□ 0.47
CLK1-211ENST00000481641 APLFQ8IW19 511 aaPredicted RBP17.96■□□□□ 0.47
CLK1-211ENST00000481641 LKAAEAR1Q8TD35 194 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 LRFN5Q96NI6 719 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 OR2A14Q96R47 310 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 CASS4Q9NQ75 786 aa17.96■□□□□ 0.47
CLK1-211ENST00000481641 SNRNP200O75643 2136 aaKnown RBP17.96■□□□□ 0.47
CLK1-211ENST00000481641 SPENQ96T58 3664 aaKnown RBP17.95■□□□□ 0.46
CLK1-211ENST00000481641 RELNP78509 3460 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 GAS8O95995 478 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 CAPN1P07384 714 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 CTSBP07858 339 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 OR56A5P0C7T3 313 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 ADRA1DP25100 572 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 CCL11P51671 97 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms