RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 DHX9Q08211 1270 aaKnown RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 VAC14Q08AM6 782 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 RPA4Q13156 261 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 CTBP1Q13363 440 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 GRB7Q14451 532 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 ZIC1Q15915 447 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 TYSND1Q2T9J0 566 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SYTL3Q4VX76 610 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 DCAF12Q5T6F0 453 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 ATP1A1-AS1Q5TC04 95 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 LYPLAL1Q5VWZ2 237 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 KIAA0930Q6ICG6 404 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 ZNF549Q6P9A3 640 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 INO80CQ6PI98 192 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 UNC5AQ6ZN44 842 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 ACVR1CQ8NER5 493 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 PEX13Q92968 403 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SLC41A2Q96JW4 573 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 CCNL2Q96S94 520 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 NAP1L3Q99457 506 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 MENTQ9BUN1 341 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SEMA4CQ9C0C4 833 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 RAB33BQ9H082 229 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SRMSQ9H3Y6 488 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 FBXO8Q9NRD0 319 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 FBXO6Q9NRD1 293 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SEMA5BQ9P283 1151 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 ASIC3Q9UHC3 531 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 IL17BQ9UHF5 180 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 PCYOX1Q9UHG3 505 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 POMT2Q9UKY4 750 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 ASF1AQ9Y294 204 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 KLHL20Q9Y2M5 609 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 TDRKHQ9Y2W6 561 aaKnown RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 MED16Q9Y2X0 877 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 MRPS18BQ9Y676 258 aaKnown RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SAR1BQ9Y6B6 198 aa11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 SPENQ96T58 3664 aaKnown RBP11.07□□□□□ -0.64
RAPGEF1-207ENST00000481260 GOLGA6L10A0A0M3HER8 536 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 FAM237BA0A1B0GVD1 139 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 SDR42E2A6NKP2 422 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 STMND1H3BQB6 276 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 DNALI1O14645 258 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 LIN7AO14910 233 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 POLR1CO15160 346 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 NDUFS3O75489 264 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 KIAA0754O94854 1291 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 DLGAP3O95886 979 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 S1PR4O95977 384 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 ST6GAL1P15907 406 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 BDKRB1P46663 353 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 CD151P48509 253 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 LAMB3Q13751 1172 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 DHX34Q14147 1143 aaKnown RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 MANEAQ5SRI9 462 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 IZUMO3Q5VZ72 239 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 ZNF470Q6ECI4 717 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 PTRHD1Q6GMV3 140 aaKnown RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 NEPROQ6NW34 567 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 CCDC81Q6ZN84 652 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 GPR155Q7Z3F1 870 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 TMEM135Q86UB9 458 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 TAX1BP1Q86VP1 789 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 OOSP2Q86WS3 158 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 CILP2Q8IUL8 1156 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 PPIL6Q8IXY8 311 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 CACNA2D3Q8IZS8 1091 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 LINC01555Q8NAE3 123 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 GALNT6Q8NCL4 622 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 ZDHHC12Q96GR4 267 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 KRT12Q99456 494 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 CARD6Q9BX69 1037 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 TRIM31Q9BZY9 425 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 TFB2MQ9H5Q4 396 aaKnown RBP11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 VPS37BQ9H9H4 285 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 KCND1Q9NSA2 647 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 ACTR10Q9NZ32 417 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 PCDHGA4Q9Y5G9 962 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 MAD1L1Q9Y6D9 718 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 RPS6KL1Q9Y6S9 549 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 COLEC10Q9Y6Z7 277 aa11.06□□□□□ -0.64
RAPGEF1-207ENST00000481260 CTAGE9A4FU28 777 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 KLHL33A6NCF5 533 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TLCD2A6NGC4 264 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SPAG6O75602 509 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 C1QL1O75973 258 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SLCO2B1O94956 709 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 NTRK1P04629 796 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 ERVK-10P10266 1014 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 MLNP12872 115 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 UGT2B7P16662 529 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SLC1A2P43004 574 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TTPAP49638 278 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms