RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 POLE3Q9NRF9 147 aa5.13□□□□□ -1.59
COPA-203ENST00000481040 TRMT6Q9UJA5 497 aaKnown RBP5.13□□□□□ -1.59
COPA-203ENST00000481040 TINAGQ9UJW2 476 aa5.13□□□□□ -1.59
COPA-203ENST00000481040 FBXL2Q9UKC9 423 aa5.13□□□□□ -1.59
COPA-203ENST00000481040 PADI3Q9ULW8 664 aa5.13□□□□□ -1.59
COPA-203ENST00000481040 DUSP12Q9UNI6 340 aa5.13□□□□□ -1.59
COPA-203ENST00000481040 SRPRBQ9Y5M8 271 aaKnown RBP5.13□□□□□ -1.59
COPA-203ENST00000481040 PRSS51A0A1B0GVH4 220 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 A0A1W2PPC1 479 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 GAGE12JA6NER3 117 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 CACNB4O00305 520 aaPredicted RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 MDM4O15151 490 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 PLGP00747 810 aaPredicted RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 CTSAP10619 480 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 ARF4P18085 180 aaPredicted RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 MAKP20794 623 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 GNLYP22749 145 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 STX2P32856 288 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 HSD17B3P37058 310 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 CTSCP53634 463 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 MTCP1P56278 107 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 P2RX3P56373 397 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 CLDN20P56880 219 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 PLA2G7Q13093 441 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 PAPD7Q5XG87 772 aaKnown RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 NEK5Q6P3R8 708 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 C1orf186Q6ZWK4 172 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 ARMC9Q7Z3E5 817 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 PPP1R42Q7Z4L9 355 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 ZC3HC1Q86WB0 502 aaKnown RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 AQP12AQ8IXF9 295 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 ELMOD2Q8IZ81 293 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 KDM8Q8N371 416 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 AADATQ8N5Z0 425 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 OR52E1Q8NGJ3 308 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 CCDC110Q8TBZ0 833 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 TMEM174Q8WUU8 243 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 SYN2Q92777 582 aaPredicted RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 TMEM186Q96B77 213 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 ZNF560Q96MR9 790 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 ZNF582Q96NG8 517 aaPredicted RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 IWS1Q96ST2 819 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 NAP1L3Q99457 506 aaPredicted RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 SLX1AQ9BQ83 275 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 LMF2Q9BU23 707 aaKnown RBP5.12□□□□□ -1.59
COPA-203ENST00000481040 TEX13BQ9BXU2 312 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 S1PR5Q9H228 398 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 SEMA6AQ9H2E6 1030 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 TOR3AQ9H497 397 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 C17orf75Q9HAS0 396 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.12□□□□□ -1.59
COPA-203ENST00000481040 MAD2L2Q9UI95 211 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 GPR132Q9UNW8 380 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 PAM16Q9Y3D7 125 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 WDR17Q8IZU2 1322 aa5.12□□□□□ -1.59
COPA-203ENST00000481040 TRBV2A0A0J9YWF9 115 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 OR2M5A3KFT3 312 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 TIMM23O14925 209 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 FLRT2O43155 660 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 TLX3O43711 291 aaPredicted RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 VNN2O95498 520 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 IGHV2-70P01814 119 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 ANKRD34CP0C6C1 535 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 SFNP31947 248 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 HTR6P50406 440 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 SELENOVP59797 346 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 KCNJ10P78508 379 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 GHRHRQ02643 423 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 TFF2Q03403 129 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 EGR4Q05215 589 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 CUL3Q13618 768 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 MAPK11Q15759 364 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 ZNF284Q2VY69 593 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 GCNT6Q5T4J0 391 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 DEF8Q6ZN54 512 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 RBM43Q6ZSC3 357 aaKnown RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 TMPRSS11BQ86T26 416 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 GPR180Q86V85 440 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 CLEC1AQ8NC01 280 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 SLC16A11Q8NCK7 471 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 ACVR1CQ8NER5 493 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 OR2AK2Q8NG84 335 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 OR5M8Q8NGP6 311 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 VANGL1Q8TAA9 524 aaPredicted RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 EXOC6Q8TAG9 804 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 SMPDL3BQ92485 455 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 MRPL38Q96DV4 380 aaKnown RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 SPRY4Q9C004 299 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 DPH5Q9H2P9 285 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 FOXP1Q9H334 677 aaPredicted RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 SLA2Q9H6Q3 261 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 Q9N2K0 584 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 NPAP1Q9NZP6 1156 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 MSRB1Q9NZV6 116 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 ARPP21Q9UBL0 812 aaPredicted RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 TLK1Q9UKI8 766 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 CCPG1Q9ULG6 757 aa5.11□□□□□ -1.59
COPA-203ENST00000481040 RRP15Q9Y3B9 282 aaKnown RBP5.11□□□□□ -1.59
COPA-203ENST00000481040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms