RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 ACADLP28330 430 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 PEBP1P30086 187 aaKnown RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 BRD3Q15059 726 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 DBN1Q16643 649 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 TMTC4Q5T4D3 741 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 UNC5AQ6ZN44 842 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 GALNT11Q8NCW6 608 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 OR5AR1Q8NGP9 310 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 OR8K5Q8NH50 307 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 CPT1BQ92523 772 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 TFGQ92734 400 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 OR2A14Q96R47 310 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 TSPY26PQ9H489 355 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 LRRC4CQ9HCJ2 640 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 SLC22A11Q9NSA0 550 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 ACTR10Q9NZ32 417 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 KLHL20Q9Y2M5 609 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 AAR2Q9Y312 384 aaKnown RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 PIKFYVEQ9Y2I7 2098 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 VPS4BO75351 444 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 CRTAMO95727 393 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 NDUFS1P28331 727 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 VAV2P52735 878 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 GSDMDP57764 484 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 PDE1BQ01064 536 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 KRT33BQ14525 404 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 ZRANB3Q5FWF4 1079 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 PRUNE1Q86TP1 453 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 CARFQ8N187 725 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 LRRC57Q8N9N7 239 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 INPP5DQ92835 1189 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 DCUN1D1Q96GG9 259 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 TCTN2Q96GX1 697 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 RANBP9Q96S59 729 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 NLE1Q9NVX2 485 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-212ENST00000480836 PLEKHB1Q9UF11 243 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-212ENST00000480836 VPS4AQ9UN37 437 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 PACSIN2Q9UNF0 486 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-212ENST00000480836 EFR3BQ9Y2G0 817 aa12.86□□□□□ -0.35
PTPN7-212ENST00000480836 EPN1Q9Y6I3 576 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-212ENST00000480836 SNRNP200O75643 2136 aaKnown RBP12.85□□□□□ -0.35
PTPN7-212ENST00000480836 A1L4Q6 167 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 MACROD2A1Z1Q3 448 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 GRID2IPA4D2P6 1211 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 H7C0S8 307 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 OR1I1O60431 355 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 TPM1P09493 284 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 MSL3P1P0C860 447 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 UGT2B7P16662 529 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 ITGALP20701 1170 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 ITGAXP20702 1163 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 PSMA3P25788 255 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CTNNA2P26232 953 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 PTPN7P35236 360 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 GRIA1P42261 906 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 TNNT3P45378 269 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CD151P48509 253 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 COPS2P61201 443 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 PRKAA1Q13131 559 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 POU6F1Q14863 301 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 SLC9A5Q14940 896 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 NCF4Q15080 339 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 KCTD19Q17RG1 926 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-212ENST00000480836 GPR33Q49SQ1 333 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CCDC38Q502W7 563 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CRB2Q5IJ48 1285 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 TAS2R42Q7RTR8 314 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 VRK3Q8IV63 474 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-212ENST00000480836 DTWD1Q8N5C7 304 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 AMER2Q8N7J2 671 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 FAM71DQ8N9W8 422 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 GLIS1Q8NBF1 620 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 ULK4Q96C45 1275 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 ZNF778Q96MU6 729 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 SMAD5Q99717 465 aaKnown RBP12.85□□□□□ -0.35
PTPN7-212ENST00000480836 MESP1Q9BRJ9 268 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 DHCR7Q9UBM7 475 aaKnown RBP12.85□□□□□ -0.35
PTPN7-212ENST00000480836 SLC2A6Q9UGQ3 507 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CIDEBQ9UHD4 219 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 CDYLQ9Y232 598 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 NTNG1Q9Y2I2 539 aa12.85□□□□□ -0.35
PTPN7-212ENST00000480836 SLC5A10A0PJK1 596 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 CCDC162PA2VCL2 907 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 MROH6A6NGR9 719 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 AGFG2O95081 481 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 UMODP07911 640 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 OTX2P32243 289 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 FOXN2P32314 431 aa12.84□□□□□ -0.35
PTPN7-212ENST00000480836 GCGRP47871 477 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms