RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 INTS10Q9NVR2 710 aaKnown RBP8.86□□□□□ -0.99
VCP-206ENST00000480327 MOCS1Q9NZB8 636 aa8.86□□□□□ -0.99
VCP-206ENST00000480327 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
VCP-206ENST00000480327 PISDQ9UG56 409 aa8.86□□□□□ -0.99
VCP-206ENST00000480327 GNPTGQ9UJJ9 305 aa8.86□□□□□ -0.99
VCP-206ENST00000480327 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
VCP-206ENST00000480327 LOXL2Q9Y4K0 774 aa8.86□□□□□ -0.99
VCP-206ENST00000480327 PSAT1Q9Y617 370 aa8.86□□□□□ -0.99
VCP-206ENST00000480327 DNMT3AQ9Y6K1 912 aaPredicted RBP8.86□□□□□ -0.99
VCP-206ENST00000480327 RNF215Q9Y6U7 377 aa8.86□□□□□ -0.99
VCP-206ENST00000480327 PRAMEF33A0A0G2JMD5 474 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 NVLO15381 856 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 PRAMEF10O60809 474 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 GSTA2P09210 222 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 LIPCP11150 499 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 PKMP14618 531 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 CHRM3P20309 590 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 SAT1P21673 171 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 RPS3P23396 243 aaKnown RBP eCLIP8.85□□□□□ -0.992e-8■■■■□ 24.6
VCP-206ENST00000480327 PDHA2P29803 388 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 CCR7P32248 378 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 LEPRP48357 1165 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 CLCNKAP51800 687 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 PGGT1BP53609 377 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 TUBB4BP68371 445 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 CYP4F2P78329 520 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 KCNC4Q03721 635 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 NFATC3Q12968 1075 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 EIF3IQ13347 325 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 FRG1Q14331 258 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 SLMAPQ14BN4 828 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 C16orf72Q14CZ0 275 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 KBTBD12Q3ZCT8 623 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 SYTL3Q4VX76 610 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 RBM20Q5T481 1227 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 ZNF549Q6P9A3 640 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 XKR5Q6UX68 686 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 ZNF574Q6ZN55 896 aaPredicted RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 SPRED1Q7Z699 444 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 LRRC6Q86X45 466 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 CNTN4Q8IWV2 1026 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 NAGSQ8N159 534 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 PPM1NQ8N819 430 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 GPATCH11Q8N954 259 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 Q8N9G6 341 aaPredicted RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 HM13Q8TCT9 377 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 LINC00615Q96LM1 132 aaPredicted RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 TSSK1BQ9BXA7 367 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 WWP1Q9H0M0 922 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 CCDC68Q9H2F9 335 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 SEMA6CQ9H3T2 930 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 COG4Q9H9E3 785 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 GALPQ9UBC7 116 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 VPS9D1Q9Y2B5 631 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 WDR37Q9Y2I8 494 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
VCP-206ENST00000480327 CFAP20Q9Y6A4 193 aaKnown RBP8.85□□□□□ -0.99
VCP-206ENST00000480327 PRR19A6NJB7 356 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 FAM159BA6NKW6 160 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 OR52A4PA6NMU1 304 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 E5RI56 91 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 QSOX1O00391 747 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 B4GAT1O43505 415 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 FAM155BO75949 473 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 ESR1P03372 595 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 F3P13726 295 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 BRAFP15056 766 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 TNFRSF8P28908 595 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 STX2P32856 288 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 PHBP35232 272 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 CD151P48509 253 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 PMS2P54278 862 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 HSPA14Q0VDF9 509 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 BIRC2Q13490 618 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 CLCA4Q14CN2 919 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 UAP1Q16222 522 aaPredicted RBP8.84□□□□□ -0.99
VCP-206ENST00000480327 TBR1Q16650 682 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 METRNLQ641Q3 311 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 DUS1LQ6P1R4 473 aaKnown RBP8.84□□□□□ -0.99
VCP-206ENST00000480327 KIAA0408Q6ZU52 694 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 PRICKLE2Q7Z3G6 844 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 C17orf82Q86X59 251 aaPredicted RBP8.84□□□□□ -0.99
VCP-206ENST00000480327 ZNF761Q86XN6 746 aaPredicted RBP8.84□□□□□ -0.99
VCP-206ENST00000480327 RELL1Q8IUW5 271 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 VRK3Q8IV63 474 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 SIDT2Q8NBJ9 832 aaKnown RBP8.84□□□□□ -0.99
VCP-206ENST00000480327 ACVR1CQ8NER5 493 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 SLC37A2Q8TED4 501 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 CDKL2Q92772 493 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 USP7Q93009 1102 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 ELMO2Q96JJ3 720 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 PANX3Q96QZ0 392 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 PARD6BQ9BYG5 372 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 IMP3Q9NV31 184 aaKnown RBP8.84□□□□□ -0.99
VCP-206ENST00000480327 TXNDC16Q9P2K2 825 aa8.84□□□□□ -0.99
VCP-206ENST00000480327 LRRK2Q5S007 2527 aa8.83□□□□□ -1
VCP-206ENST00000480327 C17orf113A0A1B0GUU1 675 aa8.83□□□□□ -1
VCP-206ENST00000480327 SLC5A10A0PJK1 596 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms