RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	MED25	Q71SY5	747 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	ZNF765	Q7L2R6	523 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	CHST15	Q7LFX5	561 aa	Predicted RBP	15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	GDF7	Q7Z4P5	450 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	NSMCE3	Q96MG7	304 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	RMI1	Q9H9A7	625 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	BFAR	Q9NZS9	450 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	ZNHIT2	Q9UHR6	403 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	RARRES3	Q9UL19	164 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	SPTB	P11277	2137 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	DCHS2	Q6V1P9	2916 aa		15.2	■□□□□ 0.02
HDLBP-238	ENST00000479894	CNTRL	Q7Z7A1	2325 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	MAGEB16	A2A368	324 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	NPIPB15	A6NHN6	443 aa	Predicted RBP	15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	PRSS44	E7EML9	344 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	RASSF9	O75901	435 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	AGT	P01019	485 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	AMD1	P17707	334 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	NELFE	P18615	380 aa	Known RBP	15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	CLCNKA	P51800	687 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	RRAD	P55042	308 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	GALNT3	Q14435	633 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	VWA5B1	Q5TIE3	1220 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	FAM199X	Q6PEV8	388 aa	Predicted RBP	15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	ZNF517	Q6ZMY9	492 aa	Predicted RBP	15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	TRIM74	Q86UV6	250 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	SLC25A41	Q8N5S1	370 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	BRSK1	Q8TDC3	778 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	POM121	Q96HA1	1249 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	LURAP1	Q96LR2	239 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	GPR63	Q9BZJ6	419 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	RAB33B	Q9H082	229 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	TSPYL1	Q9H0U9	437 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	ABCG8	Q9H221	673 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	ZFYVE1	Q9HBF4	777 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	PKD2L2	Q9NZM6	624 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	WHRN	Q9P202	907 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	SEMA5B	Q9P283	1151 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	EPHA6	Q9UF33	1036 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	SHOC2	Q9UQ13	582 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	PKP3	Q9Y446	797 aa		15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	COPG1	Q9Y678	874 aa	Known RBP	15.19	■□□□□ 0.02
HDLBP-238	ENST00000479894	C1orf232	A0A0U1RR37	186 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894		F5H423	210 aa	Predicted RBP	15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	DNALI1	O14645	258 aa	Predicted RBP	15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	LRRTM2	O43300	516 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	ASMTL	O95671	621 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	TYRP1	P17643	537 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	XRCC1	P18887	633 aa	Predicted RBP	15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	CACHD1	Q5VU97	1274 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	PWWP2B	Q6NUJ5	590 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	LRRC8B	Q6P9F7	803 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	ZDHHC12	Q96GR4	267 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	PLEKHG4B	Q96PX9	1271 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	CARD6	Q9BX69	1037 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	IL22	Q9GZX6	179 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	AGPAT4	Q9NRZ5	378 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	ANAPC5	Q9UJX4	755 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	KCNK6	Q9Y257	313 aa		15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	15.18	■□□□□ 0.02
HDLBP-238	ENST00000479894	RAD51C	O43502	376 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	KLHL41	O60662	606 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	SNX2	O60749	519 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	RAB40AL	P0C0E4	278 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	CTPS1	P17812	591 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	HMGCL	P35914	325 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	CAPZB	P47756	277 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	ACY1	Q03154	408 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	TUBB3	Q13509	450 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	IHH	Q14623	411 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	KCNJ11	Q14654	390 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	TAF1A	Q15573	450 aa	Predicted RBP	15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	DNAJC21	Q5F1R6	531 aa	Known RBP	15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	IGFL3	Q6UXB1	125 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	GLT6D1	Q7Z4J2	308 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	TSPAN33	Q86UF1	283 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	PHYKPL	Q8IUZ5	450 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	PDIK1L	Q8N165	341 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	TAB3	Q8N5C8	712 aa	Predicted RBP	15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	BLOC1S5	Q8TDH9	187 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	CPT1B	Q92523	772 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	PEX13	Q92968	403 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	SLC41A2	Q96JW4	573 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	NAT9	Q9BTE0	207 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	WASH6P	Q9NQA3	447 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	FAM114A2	Q9NRY5	505 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	CD84	Q9UIB8	345 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	ZNF711	Q9Y462	761 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	SLC30A1	Q9Y6M5	507 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	ABCA2	Q9BZC7	2435 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	CCDC88C	Q9P219	2028 aa		15.17	■□□□□ 0.02
HDLBP-238	ENST00000479894	PCSK5	Q92824	1860 aa		15.16	■□□□□ 0.02
HDLBP-238	ENST00000479894	SDR42E2	A6NKP2	422 aa		15.16	■□□□□ 0.02
HDLBP-238	ENST00000479894	KIF1C	O43896	1103 aa	Known RBP	15.16	■□□□□ 0.02
HDLBP-238	ENST00000479894	CPNE3	O75131	537 aa	Known RBP	15.16	■□□□□ 0.02
HDLBP-238	ENST00000479894	SEC31A	O94979	1220 aa	Known RBP	15.16	■□□□□ 0.02
HDLBP-238	ENST00000479894	VIP	P01282	170 aa		15.16	■□□□□ 0.02
HDLBP-238	ENST00000479894	ACP5	P13686	325 aa		15.16	■□□□□ 0.02

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