RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ABHD17AQ96GS6 310 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 PPM1MQ96MI6 270 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 HGH1Q9BTY7 390 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 MVB12BQ9H7P6 319 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 C1GALT1Q9NS00 363 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 SMARCAL1Q9NZC9 954 aa13.93□□□□□ -0.18
ATG4B-218ENST00000479554 PIPSLA2A3N6 862 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 MROH6A6NGR9 719 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
ATG4B-218ENST00000479554 QSOX1O00391 747 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 BTN3A1O00481 513 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 PDHA2P29803 388 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 NSG1P42857 185 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 LMAN1P49257 510 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 CDH17Q12864 832 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 ITIH4Q14624 930 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 CCDC38Q502W7 563 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 OR52E1Q8NGJ3 308 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 OR52K1Q8NGK4 314 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 ACTRT1Q8TDG2 376 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 SEC14L1Q92503 715 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.92□□□□□ -0.182e-7■■■■■ 62.8
ATG4B-218ENST00000479554 FRMD8P1Q9BZ68 369 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-218ENST00000479554 EPN3Q9H201 632 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 TFB2MQ9H5Q4 396 aaKnown RBP13.92□□□□□ -0.18
ATG4B-218ENST00000479554 LATS2Q9NRM7 1088 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 ANAPC2Q9UJX6 822 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 MAN2B2Q9Y2E5 1009 aa13.92□□□□□ -0.18
ATG4B-218ENST00000479554 SPENQ96T58 3664 aaKnown RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 OR51F1A6NGY5 319 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 SLC9B1P1A6NJY1 282 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 E7EVH7 732 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 MKRN2OSH3BPM6 223 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 BTN3A3O00478 584 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 LIN7AO14910 233 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 MAP3K7O43318 606 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 LIASO43766 372 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 RFPL1O75677 317 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 RECKO95980 971 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 IFNB1P01574 187 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 FTH1P02794 183 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 PRDX3P30048 256 aaKnown RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 STIP1P31948 543 aaKnown RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 FOXN2P32314 431 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 FDFT1P37268 417 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 RPS15P62841 145 aaKnown RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 BOP1Q14137 746 aaKnown RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 OASLQ15646 514 aaKnown RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 FAM199XQ6PEV8 388 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 PACS1Q6VY07 963 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 PPP1R21Q6ZMI0 780 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 TMEM135Q86UB9 458 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 AMIGO1Q86WK6 493 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 PHC3Q8NDX5 983 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 ANKRD7Q92527 254 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 TFGQ92734 400 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 MR1Q95460 341 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 RUFY1Q96T51 708 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 GPR87Q9BY21 358 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 AKIRIN1Q9H9L7 192 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-218ENST00000479554 ZNF148Q9UQR1 794 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 TP53TG5Q9Y2B4 290 aa13.91□□□□□ -0.18
ATG4B-218ENST00000479554 HEATR9A2RTY3 570 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 CCDC162PA2VCL2 907 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 C2orf74A8MZ97 194 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 TMEM150CB9EJG8 249 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
ATG4B-218ENST00000479554 CEP104O60308 925 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 ST6GAL1P15907 406 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PSMA3P25788 255 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PTPN4P29074 926 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 CASRP41180 1078 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PMS2P54278 862 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 RPS18P62269 152 aaKnown RBP13.9□□□□□ -0.18
ATG4B-218ENST00000479554 GPS2Q13227 327 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PRKG2Q13237 762 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 LAMB3Q13751 1172 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 UGT8Q16880 541 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 SYTL3Q4VX76 610 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 AFTPHQ6ULP2 937 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 SYVN1Q86TM6 617 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 RASGEF1CQ8N431 466 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 MMGT1Q8N4V1 131 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 SPATA4Q8NEY3 305 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 CPT1BQ92523 772 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 ELMO1Q92556 727 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 MS4A14Q96JA4 679 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 NRTNQ99748 197 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PITPNM3Q9BZ71 974 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 ETNK1Q9HBU6 452 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-218ENST00000479554 PRSS21Q9Y6M0 314 aa13.9□□□□□ -0.18
ATG4B-218ENST00000479554 SUN1O94901 812 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 KLK3P07288 261 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-218ENST00000479554 TUBBP07437 444 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms