RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 IL10RAQ13651 578 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 ITGA9Q13797 1035 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 PRKD1Q15139 912 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 INPP5JQ15735 1006 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 PLA2G4EQ3MJ16 856 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 LDLRAP1Q5SW96 308 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 AGBL2Q5U5Z8 902 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 C1QL3Q5VWW1 255 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 ZNF449Q6P9G9 518 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 IYDQ6PHW0 289 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 DARS2Q6PI48 645 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 C6orf15Q6UXA7 325 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 SPATA21Q7Z572 469 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 TMC3Q7Z5M5 1100 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 TRAPPC5Q8IUR0 188 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 IFT20Q8IY31 132 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 GSPT2Q8IYD1 628 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 UBL4BQ8N7F7 174 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 GPR26Q8NDV2 337 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 IPMKQ8NFU5 416 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 SPATA22Q8NHS9 363 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 BLOC1S5Q8TDH9 187 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CT55Q8WUE5 264 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CCT6BQ92526 530 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 C19orf60Q96EN9 201 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 THOC1Q96FV9 657 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 SEC16BQ96JE7 1060 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 ELMO2Q96JJ3 720 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 OLFM3Q96PB7 478 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 PLEKHG4BQ96PX9 1271 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 TIMM29Q9BSF4 260 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 TWSG1Q9GZX9 223 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 ZNF768Q9H5H4 540 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 BPIFA1Q9NP55 256 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 SCHIP1Q9P0W5 487 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 ATXN10Q9UBB4 475 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 NFKBIL1Q9UBC1 381 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 CPNE7Q9UBL6 633 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 RNF14Q9UBS8 474 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CTNNAL1Q9UBT7 734 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 KCND3Q9UK17 655 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 DNAJC16Q9Y2G8 782 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 AAR2Q9Y312 384 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 PCDHGA6Q9Y5G7 932 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 SLC30A1Q9Y6M5 507 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CSMD2Q7Z408 3487 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 ITPR3Q14573 2671 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CROCCQ5TZA2 2017 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 hCG_1818297A0A087WSY0 165 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 GLYATL1P3A0A0U1RQE8 302 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 PIPSLA2A3N6 862 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 LILRA5A6NI73 299 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 GOLGA6L10A6NI86 522 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 F5H423 210 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 APOC4-APOC2K7ER74 178 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SKAP2O75563 359 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 WFS1O76024 890 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 TJP3O95049 919 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 LCA5LO95447 670 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 CRTAMO95727 393 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 EPOP01588 193 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 APOC2P02655 101 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 RPSAP08865 295 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 RALBP11234 206 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 BPIP17213 487 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 XRCC1P18887 633 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 MSH3P20585 1137 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 AKT1P31749 480 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 HMGCLP35914 325 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 PEX19P40855 299 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ARL4DP49703 201 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SEPHS1P49903 392 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 EIF3EP60228 445 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 PPP1CAP62136 330 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 UBE2IP63279 158 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 GUCY1A3Q02108 690 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 FOXM1Q08050 763 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 C2orf54Q08AI8 447 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 TMEM115Q12893 351 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 DYNC1I2Q13409 638 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 DNASE1L3Q13609 305 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 KRT33BQ14525 404 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ITIH4Q14624 930 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SETDB1Q15047 1291 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 LLGL1Q15334 1064 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 NR6A1Q15406 480 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SEPT7Q16181 437 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 SIRPB2Q5JXA9 342 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 GKAP1Q5VSY0 366 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 FAM69BQ5VUD6 431 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ARMC6Q6NXE6 501 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 FAM199XQ6PEV8 388 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 KLHL35Q6PF15 583 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 BLOC1S3Q6QNY0 202 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 BBS12Q6ZW61 710 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ADGRG6Q86SQ4 1221 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 TRIM73Q86UV7 250 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SRRM1Q8IYB3 904 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 SYCE1Q8N0S2 351 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 CCDC63Q8NA47 563 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms