RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SLC2A6Q9UGQ3 507 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ADGRE2Q9UHX3 823 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 BTN3A3O00478 584 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ATG13O75143 517 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ERN1O75460 977 aaKnown RBP20.85■□□□□ 0.93
SDF4-206ENST00000478938 LTA4HP09960 611 aaKnown RBP20.85■□□□□ 0.93
SDF4-206ENST00000478938 NFKB1P19838 968 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ZNF79Q15937 498 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ZNF789Q5FWF6 425 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ZC3H12BQ5HYM0 836 aaKnown RBP20.85■□□□□ 0.93
SDF4-206ENST00000478938 DCAF8Q5TAQ9 597 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 ESRP1Q6NXG1 681 aaKnown RBP20.85■□□□□ 0.93
SDF4-206ENST00000478938 DET1Q7L5Y6 550 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 SLC22A9Q8IVM8 553 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 VWA5B2Q8N398 1253 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 CHURC1Q8WUH1 139 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 VAT1Q99536 393 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 TTLL2Q9BWV7 592 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 SETD4Q9NVD3 440 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 V9GYH0 126 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 A0A1B0GTL3 188 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 TYW5A2RUC4 315 aaKnown RBP20.84■□□□□ 0.93
SDF4-206ENST00000478938 ANKRD28O15084 1053 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 GSTA4O15217 222 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 TIE1P35590 1138 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 CRISP3P54108 245 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 TEKQ02763 1124 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 RFX4Q33E94 735 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 BRAT1Q6PJG6 821 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 ADHFE1Q8IWW8 467 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 SYTL5Q8TDW5 730 aaPredicted RBP20.84■□□□□ 0.93
SDF4-206ENST00000478938 C11orf54Q9H0W9 315 aaPredicted RBP20.84■□□□□ 0.93
SDF4-206ENST00000478938 RNF121Q9H920 327 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 TNFRSF10DQ9UBN6 386 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 USP21Q9UK80 565 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 DIMT1Q9UNQ2 313 aaKnown RBP20.84■□□□□ 0.93
SDF4-206ENST00000478938 KIAA0513O60268 411 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 WBP4O75554 376 aaKnown RBP20.84■□□□□ 0.93
SDF4-206ENST00000478938 SLC22A3O75751 556 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 CRKP46108 304 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 GNPDA1P46926 289 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 HUNKP57058 714 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 GRM1Q13255 1194 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 ATF7IP2Q5U623 682 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 RDH10Q8IZV5 341 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 DNASE1L2Q92874 299 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 SPATA9Q9BWV2 254 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 PORCNQ9H237 461 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 CPNE7Q9UBL6 633 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 GTF2IRD1Q9UHL9 959 aa20.84■□□□□ 0.93
SDF4-206ENST00000478938 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
SDF4-206ENST00000478938 COL11A2P13942 1736 aaPredicted RBP20.83■□□□□ 0.93
SDF4-206ENST00000478938 SURF1Q15526 300 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 IGSF11Q5DX21 431 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 PRSS42Q7Z5A4 293 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 CCDC71Q8IV32 467 aaPredicted RBP20.83■□□□□ 0.93
SDF4-206ENST00000478938 C2orf69Q8N8R5 385 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 ANKRD53Q8N9V6 530 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 C7orf57Q8NEG2 295 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 NLGN4YQ8NFZ3 816 aaPredicted RBP20.83■□□□□ 0.93
SDF4-206ENST00000478938 RDM1Q8NG50 284 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 COPS4Q9BT78 406 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 SMURF1Q9HCE7 757 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 ABCB8Q9NUT2 735 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 KLHL21Q9UJP4 597 aa20.83■□□□□ 0.93
SDF4-206ENST00000478938 ARPC4-TTLL3A0A0A6YYG9 625 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 NR3C2P08235 984 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 HOXD4P09016 255 aaPredicted RBP20.83■□□□□ 0.92
SDF4-206ENST00000478938 POU4F3Q15319 338 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 SYPL2Q5VXT5 272 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 TYW3Q6IPR3 259 aaKnown RBP20.83■□□□□ 0.92
SDF4-206ENST00000478938 TIGD7Q6NT04 549 aaPredicted RBP20.83■□□□□ 0.92
SDF4-206ENST00000478938 SCIMPQ6UWF3 145 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 LRRC8DQ7L1W4 858 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 NCLNQ969V3 563 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 AMBNQ9NP70 447 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 AUP1Q9Y679 476 aa20.83■□□□□ 0.92
SDF4-206ENST00000478938 CLRN2A0PK11 232 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 PI15O43692 258 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 EFNA1P20827 205 aaPredicted RBP20.82■□□□□ 0.92
SDF4-206ENST00000478938 RPS3P23396 243 aaKnown RBP eCLIP20.82■□□□□ 0.924e-7■■■□□ 15.2
SDF4-206ENST00000478938 NOS2P35228 1153 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 KANK2Q63ZY3 851 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 DLEU7Q6UYE1 221 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 CNTN4Q8IWV2 1026 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 CPXCR1Q8N123 301 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 L3HYPDHQ96EM0 354 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 ZNF583Q96ND8 569 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 AIG1Q9NVV5 245 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 SYNJ2BP-COX16A0A087WUM0 186 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 FHP07954 510 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 POU4F1Q01851 419 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 CREMQ03060 361 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 LCLAT1Q6UWP7 414 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 GLCCI1Q86VQ1 547 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 COMMD7Q86VX2 200 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 RNF139Q8WU17 664 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 TSPEARQ8WU66 669 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 ST8SIA2Q92186 375 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 TBATAQ96M53 351 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms