RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 EPS8L2Q9H6S3 715 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 FAM60AQ9NP50 221 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 CHST11Q9NPF2 352 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 DHCR7Q9UBM7 475 aaKnown RBP19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 PKP3Q9Y446 797 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 MED13LQ71F56 2210 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 DOCK10Q96BY6 2186 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ZNF487B1APH4 448 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 HCRTR1O43613 425 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ALOX12BO75342 701 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 PRAMEF1O95521 474 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ATXN8OSP0DMR3 200 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 COX6B1P14854 86 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 MMP11P24347 488 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 CHRNA4P43681 627 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 TDGF1P3P51864 188 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 WNT3AP56704 352 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 DEFB110Q30KQ9 67 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 IRAK1BP1Q5VVH5 260 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 SLC9A4Q6AI14 798 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ZNF324BQ6AW86 544 aaPredicted RBP19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 RPUSD3Q6P087 351 aaKnown RBP19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 SARM1Q6SZW1 724 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 SPESP1Q6UW49 350 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 KDELC1Q6UW63 502 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ADGRF3Q8IZF5 1079 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 OR52E1Q8NGJ3 308 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 RAPGEF5Q92565 580 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 CHRNA10Q9GZZ6 450 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 SPRTNQ9H040 489 aaPredicted RBP19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 TXLNGQ9NUQ3 528 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ANO10Q9NW15 660 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ACTR10Q9NZ32 417 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 ITGB1BP2Q9UKP3 347 aa19.54■□□□□ 0.72
PDLIM1-202ENST00000477757 PCDH17O14917 1159 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 BUD23O43709 281 aaKnown RBP19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 KDELR1P24390 212 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 HTR1EP28566 365 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 TESK1Q15569 626 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 ZNF630Q2M218 657 aaPredicted RBP19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 TEX44Q53QW1 395 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 AMIGO1Q86WK6 493 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 CFAP206Q8IYR0 622 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 ZNF398Q8TD17 642 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 BLOC1S5Q8TDH9 187 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■■■■■ 54.9
PDLIM1-202ENST00000477757 FKBP10Q96AY3 582 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 RBM41Q96IZ5 413 aaKnown RBP19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 TEKT5Q96M29 485 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 FERD3LQ96RJ6 166 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 SLC22A11Q9NSA0 550 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 SUCOQ9UBS9 1254 aaKnown RBP19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 FAM153AQ9UHL3 310 aa19.53■□□□□ 0.72
PDLIM1-202ENST00000477757 ANKRD12Q6UB98 2062 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 CCDC78A2IDD5 438 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 SOCS6O14544 535 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 EPOP01588 193 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 SNRPB2P08579 225 aaKnown RBP19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 PRLHRP49683 370 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 KCNK10P57789 538 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 ZIC1Q15915 447 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 STX1AQ16623 288 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 TRIM73Q86UV7 250 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 HOOK3Q86VS8 718 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 ZNF808Q8N4W9 903 aaPredicted RBP19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 SLC25A41Q8N5S1 370 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 ZNF655Q8N720 491 aaPredicted RBP19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 CCDC120Q96HB5 630 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 LHPPQ9H008 270 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 OR52A5Q9H2C5 316 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 MVB12BQ9H7P6 319 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 CDC23Q9UJX2 597 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 HS3ST3B1Q9Y662 390 aa19.52■□□□□ 0.72
PDLIM1-202ENST00000477757 LRRD1A4D1F6 860 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 APOL1O14791 398 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 CTSBP07858 339 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 PTPN3P26045 913 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 TNNT3P45378 269 aaPredicted RBP19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 PRKD1Q15139 912 aaPredicted RBP19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 TLDC1Q6P9B6 456 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 NPNTQ6UXI9 565 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 SPNS3Q6ZMD2 512 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 VSIG1Q86XK7 387 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 HGH1Q9BTY7 390 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 XKR8Q9H6D3 395 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 WDR54Q9H977 334 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 COG4Q9H9E3 785 aa19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 MRM3Q9HC36 420 aaKnown RBP19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 BZW2Q9Y6E2 419 aaKnown RBP19.51■□□□□ 0.71
PDLIM1-202ENST00000477757 IFRD1O00458 451 aaPredicted RBP19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 UGT2B7P16662 529 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 CD68P34810 354 aaPredicted RBP19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 CD151P48509 253 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 MFAP5Q13361 173 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 BOP1Q14137 746 aaKnown RBP19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 SLC1A5Q15758 541 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 INAQ16352 499 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 MYO7BQ6PIF6 2116 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 ISLR2Q6UXK2 745 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms