RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF517Q6ZMY9 492 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 PRUNE1Q86TP1 453 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 AMIGO1Q86WK6 493 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 SYTL1Q8IYJ3 562 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 FAM26EQ8N5C1 309 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 ZBTB2Q8N680 514 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 FDCSPQ8NFU4 85 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 ADAMTS17Q8TE56 1095 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 THAP4Q8WY91 577 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 CPT1BQ92523 772 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 CDKN2AIPNLQ96HQ2 116 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 FERMT1Q9BQL6 677 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 NUDT9Q9BW91 350 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 ARNT2Q9HBZ2 717 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 C1GALT1Q9NS00 363 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 NLE1Q9NVX2 485 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 SPHK1Q9NYA1 384 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 ACTR10Q9NZ32 417 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 TCFL5Q9UL49 500 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 KLHL20Q9Y2M5 609 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 TDRKHQ9Y2W6 561 aaKnown RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 HEBP2Q9Y5Z4 205 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 USP9YO00507 2555 aaPredicted RBP11.29□□□□□ -0.6
VARS2-208ENST00000477052 C17orf113A0A1B0GUU1 675 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 CCDC162PA2VCL2 907 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 OR1I1O60431 355 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 TMEM63AO94886 807 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 RECKO95980 971 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
VARS2-208ENST00000477052 RNF224P0DH78 156 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 CBSLP0DN79 551 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 UGT2B7P16662 529 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 OTX2P32243 289 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 CBSP35520 551 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 CD97P48960 835 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 GSDMDP57764 484 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 BOP1Q14137 746 aaKnown RBP11.29□□□□□ -0.6
VARS2-208ENST00000477052 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 ATCAYQ86WG3 371 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 C2orf73Q8N5S3 287 aaPredicted RBP11.29□□□□□ -0.6
VARS2-208ENST00000477052 OR52K1Q8NGK4 314 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 ATG4AQ8WYN0 398 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 ELMO1Q92556 727 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 PANX2Q96RD6 677 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 DESI2Q9BSY9 194 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 NLNQ9BYT8 704 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 PITPNM3Q9BZ71 974 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 SLC7A5P2Q9GIP4 190 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 FANCEQ9HB96 536 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 LUC7LQ9NQ29 371 aaKnown RBP11.29□□□□□ -0.6
VARS2-208ENST00000477052 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 MAP10Q9P2G4 905 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 SLC2A6Q9UGQ3 507 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
VARS2-208ENST00000477052 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 KLHL33A6NCF5 533 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 C2orf74A8MZ97 194 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 VPS4BO75351 444 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 RAB40ALP0C0E4 278 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 GP1BBP13224 206 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 GRIA1P42261 906 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 CACNG1Q06432 222 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 KYNUQ16719 465 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 GPR33Q49SQ1 333 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 MLIPQ5VWP3 458 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 SPESP1Q6UW49 350 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 PEX26Q7Z412 305 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 LRFN5Q96NI6 719 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 PSMG3-AS1Q96PY0 264 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 OR2A14Q96R47 310 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 TFB2MQ9H5Q4 396 aaKnown RBP11.28□□□□□ -0.6
VARS2-208ENST00000477052 MVB12BQ9H7P6 319 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 LRRC40Q9H9A6 602 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 MLXIPLQ9NP71 852 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 DHCR7Q9UBM7 475 aaKnown RBP11.28□□□□□ -0.6
VARS2-208ENST00000477052 SERTAD3Q9UJW9 196 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
VARS2-208ENST00000477052 IQCF5A8MTL0 148 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 BHMG1C9JSJ3 638 aaPredicted RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 E7EQ34 232 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 H7C0S8 307 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 KRT86O43790 486 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 CNOT3O75175 753 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 SEMA7AO75326 666 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 CHRM5P08912 532 aaPredicted RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 ACADLP28330 430 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 PEBP1P30086 187 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 CETN2P41208 172 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms