RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 MMP25Q9NPA2 562 aa5.86□□□□□ -1.47
SPTLC3-205ENST00000476791 PTGFRNQ9P2B2 879 aa5.86□□□□□ -1.47
SPTLC3-205ENST00000476791 DNAJB11Q9UBS4 358 aa5.86□□□□□ -1.47
SPTLC3-205ENST00000476791 RPTORQ8N122 1335 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CLIP1P30622 1438 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 LMTK2Q8IWU2 1503 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CFAP73A6NFT4 308 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 WDR64B1ANS9 1081 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 NPIPA7E9PJI5 369 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 FKTNO75072 461 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 NME6O75414 186 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 RHOBTB1O94844 696 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CRHP06850 196 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 GUSBP08236 651 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 NPIPA8P0DM63 369 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CD19P15391 556 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 KRT15P19012 456 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 F8A1P23610 371 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 EPHA8P29322 1005 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 S100A7P31151 101 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 MC5RP33032 325 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 MSX2P35548 267 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 BTDP43251 543 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ALDH3B1P43353 468 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 AFMP43652 599 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 RAB13P51153 203 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SUCLG1P53597 346 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ARSFP54793 590 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CDH13P55290 713 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CDK16Q00536 496 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CBFBQ13951 182 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 IRF3Q14653 427 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 NAB2Q15742 525 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ZIK1Q3SY52 487 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 TAF1BQ53T94 588 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 EFCAB12Q6NXP0 572 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ZFP1Q6P2D0 407 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 AFTPHQ6ULP2 937 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 MOXD1Q6UVY6 613 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 BHLHA15Q7RTS1 189 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 POLNQ7Z5Q5 900 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ANKRD46Q86W74 232 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ETFBKMTQ8IXQ9 262 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SP8Q8IXZ3 490 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 RCOR2Q8IZ40 523 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 FAM89BQ8N5H3 189 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 TOP6BLQ8N6T0 577 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CHPT1Q8WUD6 406 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 TOP1MTQ969P6 601 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CPNE4Q96A23 557 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 APIPQ96GX9 242 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 C12orf66Q96MD2 445 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ZNF48Q96MX3 618 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 LRFN5Q96NI6 719 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 PNKPQ96T60 521 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ZNF251Q9BRH9 671 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 NLNQ9BYT8 704 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 RNPEPQ9H4A4 650 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ANKZF1Q9H8Y5 726 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 LRRC40Q9H9A6 602 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 USP36Q9P275 1121 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 MYEF2Q9P2K5 600 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 NKX1-2Q9UD57 310 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 TRAF6Q9Y4K3 522 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CSADQ9Y600 493 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ACTL7AQ9Y615 435 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CSNK1G3Q9Y6M4 447 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 A0A0X1KG70 313 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SMIM31A0A1B0GVY4 71 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 TRABD2BA6NFA1 517 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ZNF213O14771 459 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 B3GALT2O43825 422 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 DPM1O60762 260 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 UBXN7O94888 489 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 PRKCBP05771 671 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SERPINA6P08185 405 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 UBTFL1P0CB47 393 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CDH1P12830 882 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SRMP19623 302 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ITIH2P19823 946 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 MAP2K4P45985 399 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CCT3P49368 545 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CEBPDP49716 269 aaPredicted RBP5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CLCN7P51798 805 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 PRPS1P60891 318 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 RESTQ13127 1097 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SMCO1Q147U7 214 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 LRRC14Q15048 493 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CHRNA2Q15822 529 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SOWAHAQ2M3V2 549 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 SLC36A3Q495N2 470 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 TOR2AQ5JU69 321 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 LRRC38Q5VT99 294 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 LRRC8DQ7L1W4 858 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 KANSL1Q7Z3B3 1105 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 GPR180Q86V85 440 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 ADGRF4Q8IZF3 695 aa5.85□□□□□ -1.47
SPTLC3-205ENST00000476791 CDK20Q8IZL9 346 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms