RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TUBA8Q9NY65 449 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-208ENST00000476724 WWOXQ9NZC7 414 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 TRPS1Q9UHF7 1281 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 CCL27Q9Y4X3 112 aa16.14■□□□□ 0.17
TMEM53-208ENST00000476724 K7EPI3 171 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 KATNA1O75449 491 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 GUCA1CO95843 209 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 ITGB6P18564 788 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 VARSP26640 1264 aaKnown RBP16.13■□□□□ 0.17
TMEM53-208ENST00000476724 NSG1P42857 185 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 SNRPD1P62314 119 aaKnown RBP16.13■□□□□ 0.17
TMEM53-208ENST00000476724 LMAN2Q12907 356 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 CHRNA6Q15825 494 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 PLEKHG6Q3KR16 790 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 RFTN2Q52LD8 501 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-208ENST00000476724 GLYATQ6IB77 296 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 EPHX4Q8IUS5 362 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 CLDN19Q8N6F1 224 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 GLB1L3Q8NCI6 653 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-208ENST00000476724 FAM110BQ8TC76 370 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 LKAAEAR1Q8TD35 194 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 NMD3Q96D46 503 aaKnown RBP16.13■□□□□ 0.17
TMEM53-208ENST00000476724 NSMCE2Q96MF7 247 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 TMEM74Q96NL1 305 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 CGREF1Q99674 301 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 ADI1Q9BV57 179 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 ACTL8Q9H568 366 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 CAAP1Q9H8G2 361 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 ELOVL2Q9NXB9 296 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 KCTD5Q9NXV2 234 aa16.13■□□□□ 0.17
TMEM53-208ENST00000476724 CEP290O15078 2479 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 EIF3FO00303 357 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ACOX3O15254 700 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ULK1O75385 1050 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 TULP3O75386 442 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 KCNH1O95259 989 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 LDLRP01130 860 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 SLC2A4P14672 509 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ETS2P15036 469 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 UGT1A6P19224 532 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 UGT1A1P22309 533 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 UGT1A4P22310 534 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 UGT1A3P35503 534 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 UGT1A5P35504 534 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ERVK-21P61565 698 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 KCTD21Q4G0X4 260 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 PRSS36Q5K4E3 855 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ISLR2Q6UXK2 745 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 TPRG1Q6ZUI0 275 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 TRIM46Q7Z4K8 759 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 TNIP2Q8NFZ5 429 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ZNF707Q96C28 371 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-208ENST00000476724 BIRC7Q96CA5 298 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ZSWIM3Q96MP5 696 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 BDH2Q9BUT1 245 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 TRIM8Q9BZR9 551 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ASIC5Q9NY37 505 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ZMYM5Q9UJ78 669 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 OAZ3Q9UMX2 235 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 AP3M1Q9Y2T2 418 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 PPIL1Q9Y3C6 166 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 CCDC160A6NGH7 325 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 DLGAP1O14490 977 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 TPST1O60507 370 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 GMNNO75496 209 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ZNF821O75541 412 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-208ENST00000476724 NCK1P16333 377 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 EPB42P16452 691 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 PCSK2P16519 638 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 HOXA9P31269 272 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 AKT1P31749 480 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 CA5AP35218 305 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 GNPDA1P46926 289 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ALDH3B2P48448 385 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 SLC36A3Q495N2 470 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ZDHHC20Q5W0Z9 365 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 FAM47BQ8NA70 645 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 LEMD2Q8NC56 503 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 ING5Q8WYH8 240 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 APOL5Q9BWW9 433 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 RPF2Q9H7B2 306 aaKnown RBP16.12■□□□□ 0.17
TMEM53-208ENST00000476724 SMOXQ9NWM0 555 aa16.12■□□□□ 0.17
TMEM53-208ENST00000476724 POLR3HQ9Y535 204 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-208ENST00000476724 MYOCOSA0A1B0GUC4 107 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 BMP10O95393 424 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 CDH1P12830 882 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 PFKLP17858 780 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 HRH2P25021 359 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 KIAA0040Q15053 153 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 PHKG1Q16816 387 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 HABP4Q5JVS0 413 aaKnown RBP16.11■□□□□ 0.17
TMEM53-208ENST00000476724 DGKKQ5KSL6 1271 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 C12orf76Q8N812 135 aaPredicted RBP16.11■□□□□ 0.17
TMEM53-208ENST00000476724 CCDC97Q96F63 343 aaPredicted RBP16.11■□□□□ 0.17
TMEM53-208ENST00000476724 SCRN2Q96FV2 425 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 SLC29A3Q9BZD2 475 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 ZDHHC3Q9NYG2 299 aa16.11■□□□□ 0.17
TMEM53-208ENST00000476724 TSR3Q9UJK0 312 aaKnown RBP16.11■□□□□ 0.17
TMEM53-208ENST00000476724 PDLIM1O00151 329 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms