RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PLOD1Q02809 727 aaPredicted RBP15.75■□□□□ 0.11
COL1A1-205ENST00000476387 BOP1Q14137 746 aaKnown RBP15.75■□□□□ 0.11
COL1A1-205ENST00000476387 PPP1R7Q15435 360 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 DNTTIP2Q5QJE6 756 aaKnown RBP15.75■□□□□ 0.11
COL1A1-205ENST00000476387 CASC4Q6P4E1 433 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 CARFQ8N187 725 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 GALNT6Q8NCL4 622 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 ACVR1CQ8NER5 493 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 FERD3LQ96RJ6 166 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 TREX1Q9NSU2 369 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 SAMD15Q9P1V8 674 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 KCND3Q9UK17 655 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 CROTQ9UKG9 612 aa15.75■□□□□ 0.11
COL1A1-205ENST00000476387 IGHV5-51A0A0C4DH38 117 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 TLCD2A6NGC4 264 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PYCARD-AS1I3L0S3 204 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 CD3EAPO15446 510 aaKnown RBP15.74■□□□□ 0.11
COL1A1-205ENST00000476387 CCNYL3P0C7X3 344 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PAMP19021 973 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 NMBRP28336 390 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PDHA2P29803 388 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 DLSTP36957 453 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PPP1CAP62136 330 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 ACY1Q03154 408 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PRKAA1Q13131 559 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 TUBB3Q13509 450 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 BRD3Q15059 726 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 ZNF658BQ4V348 819 aaPredicted RBP15.74■□□□□ 0.11
COL1A1-205ENST00000476387 ARMC3Q5W041 872 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 MPP5Q8N3R9 675 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 SIDT2Q8NBJ9 832 aaKnown RBP15.74■□□□□ 0.11
COL1A1-205ENST00000476387 LCN9Q8WX39 176 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 CPT1BQ92523 772 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 HGH1Q9BTY7 390 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 KIFC1Q9BW19 673 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 MVB12BQ9H7P6 319 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 XAB2Q9HCS7 855 aaKnown RBP15.74■□□□□ 0.11
COL1A1-205ENST00000476387 HRASLS2Q9NWW9 162 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 LNPEPQ9UIQ6 1025 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 RARRES3Q9UL19 164 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PADI1Q9ULC6 663 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PYCARDQ9ULZ3 195 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 SOX13Q9UN79 622 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PCDHB3Q9Y5E6 796 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 PCDHGA6Q9Y5G7 932 aa15.74■□□□□ 0.11
COL1A1-205ENST00000476387 UBA6A0AVT1 1052 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-205ENST00000476387 OR6C74A6NCV1 312 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 PFDN6O15212 129 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 TMEM63AO94886 807 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 RECKO95980 971 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 MLNP12872 115 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 FOLR1P15328 257 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 F8A1P23610 371 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 ARL4DP49703 201 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 SEMA3AQ14563 771 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 DEFB109BQ30KR1 87 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 ANKRD22Q5VYY1 191 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 MRNIPQ6NTE8 343 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 D2HGDHQ8N465 521 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 C9orf43Q8TAL5 461 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-205ENST00000476387 TFGQ92734 400 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-205ENST00000476387 MFSD3Q96ES6 412 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 ELMO2Q96JJ3 720 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 NAPGQ99747 312 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-205ENST00000476387 MAP3K3Q99759 626 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 SRMSQ9H3Y6 488 aa15.73■□□□□ 0.11
COL1A1-205ENST00000476387 MARCH4Q9P2E8 410 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-205ENST00000476387 MRPS18BQ9Y676 258 aaKnown RBP15.73■□□□□ 0.11
COL1A1-205ENST00000476387 C21orf140B9A014 251 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 GOLGA8MH3BSY2 632 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 MATN2O00339 956 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 PRMT5O14744 637 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-205ENST00000476387 AVILO75366 819 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 NDUFS3O75489 264 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 VAPBO95292 243 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 HSD11B2P80365 405 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 TMED2Q15363 201 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 PTRHD1Q6GMV3 140 aaKnown RBP15.72■□□□□ 0.11
COL1A1-205ENST00000476387 KIAA0930Q6ICG6 404 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-205ENST00000476387 C16orf46Q6P387 395 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 CES3Q6UWW8 571 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 SDCCAG8Q86SQ7 713 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-205ENST00000476387 LDB1Q86U70 411 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-205ENST00000476387 MCUQ8NE86 351 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 OR4E2Q8NGC2 313 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 OR8K5Q8NH50 307 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 CAPZA3Q96KX2 299 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 TRIM4Q9C037 500 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 DDX47Q9H0S4 455 aaKnown RBP15.72■□□□□ 0.11
COL1A1-205ENST00000476387 FGF21Q9NSA1 209 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 ASIC3Q9UHC3 531 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 GNPTGQ9UJJ9 305 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 ANAPC2Q9UJX6 822 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 ASF1AQ9Y294 204 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 NEU2Q9Y3R4 380 aa15.72■□□□□ 0.11
COL1A1-205ENST00000476387 NBASA2RRP1 2371 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 SLC5A10A0PJK1 596 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 GSAPA4D1B5 854 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 CTAGE9A4FU28 777 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 ZBTB11O95625 1053 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms