RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TMEM74Q96NL1 305 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 FAM153BP0C7A2 387 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 MYBL2P10244 700 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 SPRP35270 261 aaPredicted RBP28.77■■■□□ 2.2
HOXB3-208ENST00000476342 CAPZBP47756 277 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 RGS4P49798 205 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 PMS2P54278 862 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 PRKG2Q13237 762 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 FAM153CQ494X1 144 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 TTC23LQ6PF05 361 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 WDR74Q6RFH5 385 aaPredicted RBP28.77■■■□□ 2.2
HOXB3-208ENST00000476342 DCUN1D3Q8IWE4 304 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 LCN9Q8WX39 176 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 GRAMD1AQ96CP6 724 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 NUDT22Q9BRQ3 303 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 SCNM1Q9BWG6 230 aa28.77■■■□□ 2.2
HOXB3-208ENST00000476342 TSR3Q9UJK0 312 aaKnown RBP28.77■■■□□ 2.2
HOXB3-208ENST00000476342 CSO75390 466 aaKnown RBP28.76■■■□□ 2.19
HOXB3-208ENST00000476342 TOP3BO95985 862 aaKnown RBP28.76■■■□□ 2.19
HOXB3-208ENST00000476342 TYRP1P17643 537 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 MCM3P25205 808 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 CSF2RBP32927 897 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 TIAL1Q01085 375 aaKnown RBP eCLIP28.76■■■□□ 2.19
HOXB3-208ENST00000476342 EFTUD2Q15029 972 aaKnown RBP eCLIP28.76■■■□□ 2.191e-6■■□□□ 12.1
HOXB3-208ENST00000476342 ISXQ2M1V0 245 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 CPNE9Q8IYJ1 553 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 OR52E1Q8NGJ3 308 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 TFB2MQ9H5Q4 396 aaKnown RBP28.76■■■□□ 2.19
HOXB3-208ENST00000476342 WASF3Q9UPY6 502 aa28.76■■■□□ 2.19
HOXB3-208ENST00000476342 TDRKHQ9Y2W6 561 aaKnown RBP28.76■■■□□ 2.19
HOXB3-208ENST00000476342 A0A087WUV0 522 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 MED19A0JLT2 244 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 FAM149AA5PLN7 773 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 FAM221BA6H8Z2 402 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 TMX2-CTNND1H3BSU7 103 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 MATN4O95460 622 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 MPC1LP0DKB6 136 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 SAT1P21673 171 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 CCNFP41002 786 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 LIMK2P53671 638 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 SLC12A2P55011 1212 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 TARDBPQ13148 414 aaKnown RBP eCLIP28.75■■■□□ 2.198e-7■■■■■ 37.6
HOXB3-208ENST00000476342 UBAP2Q5T6F2 1119 aaKnown RBP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 TMEM71Q6P5X7 295 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 CCNI2Q6ZMN8 369 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 OOSP2Q86WS3 158 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 PLXDC1Q8IUK5 500 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 OR4D9Q8NGE8 314 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 MAGEC3Q8TD91 643 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 JPH3Q8WXH2 748 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 OLFM1Q99784 485 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 NFS1Q9Y697 457 aa28.75■■■□□ 2.19
HOXB3-208ENST00000476342 V9GYY5 206 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-208ENST00000476342 ABHD2P08910 425 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 PDX1P52945 283 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 INHBCP55103 352 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 POU4F1Q01851 419 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 PAQR3Q6TCH7 311 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 RSC1A1Q92681 617 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 GPR22Q99680 433 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 SRMSQ9H3Y6 488 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 OGFRQ9NZT2 677 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 KLK13Q9UKR3 277 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 RUVBL2Q9Y230 463 aaKnown RBP28.74■■■□□ 2.19
HOXB3-208ENST00000476342 NEUROG3Q9Y4Z2 214 aa28.74■■■□□ 2.19
HOXB3-208ENST00000476342 CCKBRP32239 447 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 CFHR1Q03591 330 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 TMPRSS9Q7Z410 1059 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 SLITRK4Q8IW52 837 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 OR4E2Q8NGC2 313 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 TSPAN17Q96FV3 270 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 TXLNGYQ9BZA5 131 aa28.73■■■□□ 2.19
HOXB3-208ENST00000476342 OR5K3A6NET4 321 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 RIPK2O43353 540 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 SHMT2P34897 504 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 IL2P60568 153 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 VSNL1P62760 191 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 ZFP36L1Q07352 338 aaKnown RBP28.72■■■□□ 2.19
HOXB3-208ENST00000476342 ERCC6LQ2NKX8 1250 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 WDR93Q6P2C0 686 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 AMIGO1Q86WK6 493 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 RAD51AP1Q96B01 352 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 STRADBQ9C0K7 418 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 RAB33BQ9H082 229 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 POPDC3Q9HBV1 291 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 ANGPTL2Q9UKU9 493 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 SLC39A10Q9ULF5 831 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 MTO1Q9Y2Z2 717 aaKnown RBP28.72■■■□□ 2.19
HOXB3-208ENST00000476342 ENTPD2Q9Y5L3 495 aa28.72■■■□□ 2.19
HOXB3-208ENST00000476342 MN1Q10571 1320 aaPredicted RBP28.71■■■□□ 2.19
HOXB3-208ENST00000476342 C1orf105O95561 183 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 CATP04040 527 aaKnown RBP28.71■■■□□ 2.19
HOXB3-208ENST00000476342 HOXB3P14651 431 aaPredicted RBP28.71■■■□□ 2.19
HOXB3-208ENST00000476342 SPINK2P20155 84 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 TAS2R39P59534 338 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 SHC2P98077 582 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 PRKAA1Q13131 559 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 TRA2AQ13595 282 aaKnown RBP eCLIP28.71■■■□□ 2.19
HOXB3-208ENST00000476342 PHF19Q5T6S3 580 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms