RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CSE1LP55060 971 aaKnown RBP4.6□□□□□ -1.67
PTCD3-211ENST00000476215 RALGDSQ12967 914 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 KYNUQ16719 465 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 CRY2Q49AN0 593 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 CORO6Q6QEF8 472 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 DGLUCYQ7Z3D6 616 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 IQCHQ86VS3 1027 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 DCUN1D3Q8IWE4 304 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 CFAP206Q8IYR0 622 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 TDRD5Q8NAT2 981 aaKnown RBP4.6□□□□□ -1.67
PTCD3-211ENST00000476215 SLAMF9Q96A28 289 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 SGK494Q96LW2 274 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 MYADMQ96S97 322 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 BTBD10Q9BSF8 475 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 GPR88Q9GZN0 384 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 RABEP2Q9H5N1 569 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 NOL11Q9H8H0 719 aaKnown RBP4.6□□□□□ -1.67
PTCD3-211ENST00000476215 ANKZF1Q9H8Y5 726 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 CNOT10Q9H9A5 744 aaKnown RBP4.6□□□□□ -1.67
PTCD3-211ENST00000476215 SDF2L1Q9HCN8 221 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 WDR35Q9P2L0 1181 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 NFKBIL1Q9UBC1 381 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-211ENST00000476215 SLC7A7Q9UM01 511 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 FEZF1A0PJY2 475 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 OR10H2O60403 315 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 GGPS1O95749 300 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 UMODP07911 640 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 FGF5P12034 268 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 PAX1P15863 534 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 DCTP40126 519 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 CDH11P55287 796 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 CX3CL1P78423 397 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 TECRLQ5HYJ1 363 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 WDR38Q5JTN6 314 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 SLC27A1Q6PCB7 646 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 LINGO4Q6UY18 593 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 PLD3Q8IV08 490 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 FOXP4Q8IVH2 680 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-211ENST00000476215 TTC30BQ8N4P2 665 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 KLHDC9Q8NEP7 349 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 OR6J1Q8NGC5 347 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 TM9SF4Q92544 642 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 CNDP2Q96KP4 475 aaKnown RBP4.59□□□□□ -1.67
PTCD3-211ENST00000476215 LINC00615Q96LM1 132 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-211ENST00000476215 SFXN2Q96NB2 322 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 SEPHS2Q99611 448 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 VN1R1Q9GZP7 353 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 VPS33BQ9H267 617 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 PIH1D3Q9NQM4 214 aaKnown RBP4.59□□□□□ -1.67
PTCD3-211ENST00000476215 ECHDC1Q9NTX5 307 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 PRMT7Q9NVM4 692 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-211ENST00000476215 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-211ENST00000476215 TUBE1Q9UJT0 475 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 NME7Q9Y5B8 376 aa4.59□□□□□ -1.67
PTCD3-211ENST00000476215 ATAD2BQ9ULI0 1458 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 FLT1P17948 1338 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 TMEM221A6NGB7 291 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 URADA6NGE7 173 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 DUXAA6NLW8 204 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 E9PI62 339 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 SPRY1O43609 319 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 CIDEAO60543 219 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 DIAPH2O60879 1101 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 DANCRP0C864 163 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 EEF1DP29692 281 aaKnown RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 MTHFRP42898 656 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 LINC01547P58512 204 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 HNRNPKP61978 463 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 DMPKQ09013 629 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 ZNF628Q5EBL2 1059 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 KRT80Q6KB66 452 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 MARK2Q7KZI7 788 aaKnown RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 CENPVQ7Z7K6 275 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 ARHGAP24Q8N264 748 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 DNAJC22Q8N4W6 341 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 STPG4Q8N801 248 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 SLC47A1Q96FL8 570 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 RTP3Q9BQQ7 232 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 RHNO1Q9BSD3 238 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 CCDC177Q9NQR7 707 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 CFDP1Q9UEE9 299 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-211ENST00000476215 OSGIN1Q9UJX0 560 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 ACAD8Q9UKU7 415 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 PADI2Q9Y2J8 665 aa4.58□□□□□ -1.68
PTCD3-211ENST00000476215 SOS1Q07889 1333 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-211ENST00000476215 WDR81Q562E7 1941 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 A0A1W2PPM1 405 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 GAPDHSO14556 408 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-211ENST00000476215 TBX10O75333 385 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 SLCO2B1O94956 709 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 SLC6A6P31641 620 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 PCGF2P35227 344 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 PDX1P52945 283 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 KLHL26Q53HC5 615 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 TCP11X2Q5H9J9 407 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 ARMC4Q5T2S8 1044 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 SFMBT2Q5VUG0 894 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 MEX3BQ6ZN04 569 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms