RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 XAB2Q9HCS7 855 aaKnown RBP20.54■□□□□ 0.88
LIME1-204ENST00000476183 IL1RAPL1Q9NZN1 696 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 GSAPA4D1B5 854 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 FANCGO15287 622 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 NDUFS3O75489 264 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 SPAG6O75602 509 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 KIAA0754O94854 1291 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 ZBTB11O95625 1053 aaPredicted RBP20.53■□□□□ 0.88
LIME1-204ENST00000476183 PRB1P04280 392 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 RPS3P23396 243 aaKnown RBP eCLIP20.53■□□□□ 0.882e-11■■□□□ 11.8
LIME1-204ENST00000476183 AOAHP28039 575 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 PRDX3P30048 256 aaKnown RBP20.53■□□□□ 0.88
LIME1-204ENST00000476183 MAGEA3P43357 314 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 CYP4F2P78329 520 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 HSD11B2P80365 405 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 TYSND1Q2T9J0 566 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.53■□□□□ 0.88
LIME1-204ENST00000476183 CTSL3PQ5NE16 218 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 ARMC3Q5W041 872 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 PTRHD1Q6GMV3 140 aaKnown RBP20.53■□□□□ 0.88
LIME1-204ENST00000476183 PPP1R3BQ86XI6 285 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 CREG2Q8IUH2 290 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 RASGRP3Q8IV61 690 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 OTUD6BQ8N6M0 293 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 OR5K2Q8NHB8 316 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 CAPZA3Q96KX2 299 aa20.53■□□□□ 0.88
LIME1-204ENST00000476183 TRIT1Q9H3H1 467 aaKnown RBP20.53■□□□□ 0.88
LIME1-204ENST00000476183 FASNP49327 2511 aaKnown RBP20.53■□□□□ 0.88
LIME1-204ENST00000476183 FAM237BA0A1B0GVD1 139 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 SLC9B1P1A6NJY1 282 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 SDR42E2A6NKP2 422 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 MATN2O00339 956 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 CDH3P22223 829 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 PTGIRP43119 386 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 ARL4DP49703 201 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 EIF3BP55884 814 aaKnown RBP20.52■□□□□ 0.88
LIME1-204ENST00000476183 MAP7Q14244 749 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 PPP1R7Q15435 360 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 ANKRD20A4Q4UJ75 823 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 RNASEH2BQ5TBB1 312 aaKnown RBP20.52■□□□□ 0.88
LIME1-204ENST00000476183 MRNIPQ6NTE8 343 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 UNC5AQ6ZN44 842 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 CARFQ8N187 725 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 GALNT6Q8NCL4 622 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 LSM14AQ8ND56 463 aaKnown RBP20.52■□□□□ 0.88
LIME1-204ENST00000476183 ASZ1Q8WWH4 475 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 LPGAT1Q92604 370 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 ZNF669Q96BR6 464 aaPredicted RBP20.52■□□□□ 0.88
LIME1-204ENST00000476183 BIRC8Q96P09 236 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 TSSK1BQ9BXA7 367 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 SLC12A9Q9BXP2 914 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 PDE7BQ9NP56 450 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 C1GALT1Q9NS00 363 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 GNPTGQ9UJJ9 305 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 RARRES3Q9UL19 164 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 PLAGL1Q9UM63 463 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 BTRCQ9Y297 605 aa20.52■□□□□ 0.88
LIME1-204ENST00000476183 TDRKHQ9Y2W6 561 aaKnown RBP20.52■□□□□ 0.88
LIME1-204ENST00000476183 SLCO2B1O94956 709 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 F7P08709 466 aaPredicted RBP20.51■□□□□ 0.87
LIME1-204ENST00000476183 ST6GAL1P15907 406 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 ACY1Q03154 408 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 ABHD18Q0P651 414 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 GPR19Q15760 415 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 TAF1BQ53T94 588 aaPredicted RBP20.51■□□□□ 0.87
LIME1-204ENST00000476183 DNAJC21Q5F1R6 531 aaKnown RBP20.51■□□□□ 0.87
LIME1-204ENST00000476183 PWWP2BQ6NUJ5 590 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 CENPUQ71F23 418 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 TMEM135Q86UB9 458 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 LRRC6Q86X45 466 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 PPIL6Q8IXY8 311 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 SLCO2A1Q92959 643 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 SIGLEC10Q96LC7 697 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 NAPGQ99747 312 aaPredicted RBP20.51■□□□□ 0.87
LIME1-204ENST00000476183 PITPNM3Q9BZ71 974 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 FGF21Q9NSA1 209 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 ACTR10Q9NZ32 417 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 SAMD15Q9P1V8 674 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 IL17BQ9UHF5 180 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 PCYOX1Q9UHG3 505 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 POLG2Q9UHN1 485 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 LNPEPQ9UIQ6 1025 aa20.51■□□□□ 0.87
LIME1-204ENST00000476183 SNRNP200O75643 2136 aaKnown RBP20.51■□□□□ 0.87
LIME1-204ENST00000476183 ZCWPW2A0A1B0GU75 182 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 MAGEB16A2A368 324 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 C2orf74A8MZ97 194 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 TK2O00142 265 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 APOA4P06727 396 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 PVRP15151 417 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 OGNP20774 298 aaKnown RBP20.5■□□□□ 0.87
LIME1-204ENST00000476183 FMO4P31512 558 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 STAT5AP42229 794 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 TUBB4BP68371 445 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 ABRQ12979 859 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 PTK6Q13882 451 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 TUBB2AQ13885 445 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 DHX34Q14147 1143 aaKnown RBP20.5■□□□□ 0.87
LIME1-204ENST00000476183 ZNF789Q5FWF6 425 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 NEPROQ6NW34 567 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 C6orf15Q6UXA7 325 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms