RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CD151P48509 253 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 PMS2P54278 862 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 CSE1LP55060 971 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 TAS2R39P59534 338 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 TUBB4BP68371 445 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 BOP1Q14137 746 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SLC29A2Q14542 456 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 NR1D2Q14995 579 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SLMAPQ14BN4 828 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 C14orf28Q4W4Y0 310 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 ACSBG2Q5FVE4 666 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 PTRHD1Q6GMV3 140 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 DHRS13Q6UX07 377 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 CYHR1Q6ZMK1 362 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 TRMT10CQ7L0Y3 403 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SLC26A11Q86WA9 606 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 CEP97Q8IW35 865 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SLC22A15Q8IZD6 547 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 PPM1NQ8N819 430 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SIDT2Q8NBJ9 832 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SNIP1Q8TAD8 396 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 CD200R1Q8TD46 325 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 ELMO1Q92556 727 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 DLG3Q92796 817 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 KCNJ9Q92806 393 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 FGF11Q92914 225 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 NXPE2Q96DL1 559 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 ATXN7L3BQ96GX2 97 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 NAF1Q96HR8 494 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 VPS39Q96JC1 886 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 TTC1Q99614 292 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 GPR21Q99679 349 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 DHRS4Q9BTZ2 278 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 WWP1Q9H0M0 922 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 TSPYL1Q9H0U9 437 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 RHOJQ9H4E5 214 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 SLC40A1Q9NP59 571 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 ZFATQ9P243 1243 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 CPNE7Q9UBL6 633 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 GNPTGQ9UJJ9 305 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 ACSL5Q9ULC5 683 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 PADI4Q9UM07 663 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 RUVBL2Q9Y230 463 aaKnown RBP6.82□□□□□ -1.32
LIMD1-204ENST00000474665 VPS9D1Q9Y2B5 631 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 MAN2B2Q9Y2E5 1009 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 VWA7Q9Y334 891 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 DHRS7Q9Y394 339 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 PCDHB1Q9Y5F3 818 aa6.82□□□□□ -1.32
LIMD1-204ENST00000474665 KIR2DS5A0A0G2JLQ3 304 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 A0A0G2JNG1 304 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 A0A1W2PQM1 296 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CPED1A4D0V7 1026 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 PDZK1P1A8MUH7 402 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 H3BMM5 538 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 KIR2DS3K7RE56 304 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 LIN7AO14910 233 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CTIFO43310 598 aaKnown RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 TNFSF14O43557 240 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 NUDT21O43809 227 aaKnown RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 SPAG6O75602 509 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 MATN4O95460 622 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 LDOC1O95751 146 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 FTH1P02794 183 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 SHBGP04278 402 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 ABHD2P08910 425 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 GSTM1P09488 218 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 MTHFD1P11586 935 aaKnown RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 STX2P32856 288 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 HSD17B3P37058 310 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 GP5P40197 560 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 LIMK2P53671 638 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 OR1D5P58170 312 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 GSTM4Q03013 218 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 HSPA14Q0VDF9 509 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 RPA4Q13156 261 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 GRB7Q14451 532 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 ZNF460Q14592 562 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 KIR2DS5Q14953 304 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 NR0B2Q15466 257 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 ZKSCAN8Q15776 578 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 HECTD2Q5U5R9 776 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 PAQR3Q6TCH7 311 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 EFL1Q7Z2Z2 1120 aaKnown RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 TMPRSS9Q7Z410 1059 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CTAGE3PQ8IX95 158 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 ZBTB2Q8N680 514 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 GPATCH11Q8N954 259 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 PHC3Q8NDX5 983 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 DCAKDQ8WVC6 231 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 ANKRD49Q8WVL7 239 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 ASZ1Q8WWH4 475 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 SLC44A1Q8WWI5 657 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 JPH3Q8WXH2 748 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CCDC74AQ96AQ1 378 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 MRRFQ96E11 262 aaKnown RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 LIN37Q96GY3 246 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 PSMG3-AS1Q96PY0 264 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms