RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ASB14A6NK59 587 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 ANKRD28O15084 1053 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 EPHA2P29317 976 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 DAPP51397 102 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 SEMA3AQ14563 771 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 BHLHA9Q7RTU4 235 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 SIX5Q8N196 739 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 UBE2FQ969M7 185 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 SMOQ99835 787 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 PAQR5Q9NXK6 330 aaPredicted RBP18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 KLK14Q9P0G3 267 aa18.27■□□□□ 0.52
ECHDC1-214ENST00000474289 M0R082 166 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 ICMTO60725 284 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 OR4F21O95013 312 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 SCELO95171 688 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 CD4P01730 458 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 WARSP23381 471 aaKnown RBP18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 CCR1P32246 355 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 P2RX3P56373 397 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 MAXP61244 160 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 ZMIZ2Q8NF64 920 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 OR52E4Q8NGH9 312 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 CDK15Q96Q40 435 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 APOL4Q9BPW4 351 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 TTYH2Q9BSA4 534 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 SLC25A51Q9H1U9 297 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 MAGIXQ9H6Y5 334 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 TXNRD2Q9NNW7 524 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 ERVW-1Q9UQF0 538 aa18.27■□□□□ 0.51
ECHDC1-214ENST00000474289 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CDC7O00311 574 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 MRPS14O60783 128 aaKnown RBP18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CNMDO75829 334 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 MLYCDO95822 493 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 SERPINA1P01009 418 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 DNTTP04053 509 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CD86P42081 329 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CTSKP43235 329 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 VGLL4Q14135 290 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 MFSD10Q14728 455 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 PTPRCAPQ14761 206 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 SOWAHCQ53LP3 525 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CEP78Q5JTW2 689 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 WDR45BQ5MNZ6 344 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 SLC27A1Q6PCB7 646 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 PAQR3Q6TCH7 311 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 PRR23CQ6ZRP0 262 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CEP68Q76N32 757 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 GPR149Q86SP6 731 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 EGLN2Q96KS0 407 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 SDHCQ99643 169 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 CLPBQ9H078 707 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 RNF167Q9H6Y7 350 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 POPDC3Q9HBV1 291 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 C14orf119Q9NWQ9 140 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 POLR3HQ9Y535 204 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 ASB1Q9Y576 335 aa18.26■□□□□ 0.51
ECHDC1-214ENST00000474289 SMIM28A0A1B0GU29 152 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 CREG1O75629 220 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 SEMA3DO95025 777 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 SNX4O95219 450 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 RETP07949 1114 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 EFNA1P20827 205 aaPredicted RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 GRK5P34947 590 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 DDOSTP39656 456 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 PNPLA4P41247 253 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 IHHQ14623 411 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 BCL7AQ4VC05 210 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 CARD16Q5EG05 197 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 TIGD7Q6NT04 549 aaPredicted RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 GPRIN3Q6ZVF9 776 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 CCDC71Q8IV32 467 aaPredicted RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 SLC13A3Q8WWT9 602 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 RASSF5Q8WWW0 418 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 GTF2H4Q92759 462 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 FUBP1Q96AE4 644 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 MYOCQ99972 504 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 SLC25A37Q9NYZ2 338 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 NDRG4Q9ULP0 352 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 A0A0U1RQS6 177 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 LOC105371267A0A1B0GV96 52 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 NFKBIEO00221 500 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 CD3EAPO15446 510 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 LDB2O43679 373 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 WBP4O75554 376 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 GLP2RO95838 553 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 NRIP1P48552 1158 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 HTR6P50406 440 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 LILRA4P59901 499 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 ARHGAP1Q07960 439 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 KIAA0040Q15053 153 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 LRRC26Q2I0M4 334 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 SV2CQ496J9 727 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 WSCD1Q658N2 575 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 KDM4DQ6B0I6 523 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 MSRB3Q8IXL7 192 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms