RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C16orf72Q14CZ0 275 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 ZNF789Q5FWF6 425 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 CNSTQ6PJW8 725 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 UNC5DQ6UXZ4 953 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 CAPN12Q6ZSI9 719 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 FAM92BQ6ZTR7 304 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 AMIGO1Q86WK6 493 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 KDF1Q8NAX2 398 aaPredicted RBP13.38□□□□□ -0.27
USF1-205ENST00000473969 OR52E1Q8NGJ3 308 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 OR5AR1Q8NGP9 310 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 MAGEC3Q8TD91 643 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 KCNJ9Q92806 393 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 SLC46A1Q96NT5 459 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 CD180Q99467 661 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 TFB2MQ9H5Q4 396 aaKnown RBP13.38□□□□□ -0.27
USF1-205ENST00000473969 OGFRQ9NZT2 677 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 PDP2Q9P2J9 529 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 TXNDC16Q9P2K2 825 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 MN1Q10571 1320 aaPredicted RBP13.38□□□□□ -0.27
USF1-205ENST00000473969 UNC13CQ8NB66 2214 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 ESYT3A0FGR9 886 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 EFCAB7A8K855 629 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 DXOO77932 396 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 C9P02748 559 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 GSTA2P09210 222 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 POLR2CP19387 275 aaPredicted RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 ATP5DP30049 168 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 CCNFP41002 786 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 SKIV2L2P42285 1042 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 SEPHS1P49903 392 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 GFERP55789 205 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 ILF2Q12905 390 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 CBLBQ13191 982 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 FASTKD3Q14CZ7 662 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 CYB5D1Q6P9G0 228 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 IGF2-ASQ6U949 168 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 C3orf62Q6ZUJ4 267 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 ARHGAP22Q7Z5H3 698 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 GALNT7Q86SF2 657 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 VRK3Q8IV63 474 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 DCUN1D3Q8IWE4 304 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 CNTN4Q8IWV2 1026 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 NOA1Q8NC60 698 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 IFT81Q8WYA0 676 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 UBXN4Q92575 508 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 INPP5DQ92835 1189 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 FGF11Q92914 225 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 AARSD1Q9BTE6 412 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 FAM129AQ9BZQ8 928 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 LATS2Q9NRM7 1088 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 TAS2R13Q9NYV9 303 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 KLHL42Q9P2K6 505 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 TRMT6Q9UJA5 497 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 TSR3Q9UJK0 312 aaKnown RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 SLC39A10Q9ULF5 831 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 CORO1CQ9ULV4 474 aaPredicted RBP13.37□□□□□ -0.27
USF1-205ENST00000473969 CDYLQ9Y232 598 aa13.37□□□□□ -0.27
USF1-205ENST00000473969 C2orf74A8MZ97 194 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 RRP8O43159 456 aaKnown RBP13.36□□□□□ -0.27
USF1-205ENST00000473969 AHSGP02765 367 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 F7P08709 466 aaPredicted RBP13.36□□□□□ -0.27
USF1-205ENST00000473969 ANKRD34CP0C6C1 535 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 CBSLP0DN79 551 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 ENO3P13929 434 aaPredicted RBP13.36□□□□□ -0.27
USF1-205ENST00000473969 ITIH1P19827 911 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 CBSP35520 551 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 MAGEA4P43358 317 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 RGS4P49798 205 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 RAB15P59190 212 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 TRADDQ15628 312 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 ST3GAL2Q16842 350 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 TRMT10BQ6PF06 316 aaKnown RBP13.36□□□□□ -0.27
USF1-205ENST00000473969 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
USF1-205ENST00000473969 TAAR9Q96RI9 348 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 GPR21Q99679 349 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
USF1-205ENST00000473969 XKR8Q9H6D3 395 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 SLC39A1Q9NY26 324 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 ZMIZ1Q9ULJ6 1067 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 DHRS7Q9Y394 339 aa13.36□□□□□ -0.27
USF1-205ENST00000473969 A0A1W2PNU3 283 aaPredicted RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 PIPSLA2A3N6 862 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 TLCD2A6NGC4 264 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 SPAG6O75602 509 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 CATP04040 527 aaKnown RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 CCL4P13236 92 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 CDH3P22223 829 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 MAP4P27816 1152 aaKnown RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 SSTR1P30872 391 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 CLCN7P51798 805 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 FOXM1Q08050 763 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 KLHL38Q2WGJ6 581 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms