RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CRKLP46109 303 aaKnown RBP4.07□□□□□ -1.76
BRCA1-212ENST00000473961 C21orf58P58505 322 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 RPS18P62269 152 aaKnown RBP4.07□□□□□ -1.76
BRCA1-212ENST00000473961 ASIC1P78348 528 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 DLK1P80370 383 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 ABATP80404 500 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 Q0VFX4 171 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 RAB6CQ53S08 254 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 C11orf63Q6NUN7 778 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 NOTUMQ6P988 496 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 GBP6Q6ZN66 633 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 Q75L30 129 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 COMMD2Q86X83 199 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 GPALPP1Q8IXQ4 340 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 CARNMT1Q8N4J0 409 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 GBGT1Q8N5D6 347 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 OR7G3Q8NG95 312 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 OR52I2Q8NH67 350 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-212ENST00000473961 SSMEM1Q8WWF3 244 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 SEMA4DQ92854 862 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 ATP6V0A1Q93050 837 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 STAMBPL1Q96FJ0 436 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 TMEM19Q96HH6 336 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 ABHD8Q96I13 439 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 C1QTNF7Q9BXJ2 289 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 SPRY4Q9C004 299 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 RAB6CQ9H0N0 254 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 FKRPQ9H9S5 495 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 CDH20Q9HBT6 801 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 KLHL1Q9NR64 748 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 NPAP1Q9NZP6 1156 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 TXNDC16Q9P2K2 825 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 MOSPD1Q9UJG1 213 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 ITM2BQ9Y287 266 aa4.07□□□□□ -1.76
BRCA1-212ENST00000473961 SPIN1Q9Y657 262 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-212ENST00000473961 IGLV5-37A0A075B6J1 123 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 HYKKA2RU49 373 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 TMEM221A6NGB7 291 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 PRR32B1ATL7 298 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 PROB1E7EW31 1015 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 AP5Z1O43299 807 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 HTATSF1O43719 755 aaKnown RBP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 RTN2O75298 545 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 INHBAP08476 426 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 SPP1P10451 314 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 DAOP14920 347 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 CSF2RAP15509 400 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 SSTR2P30874 369 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 AHRP35869 848 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 ANP32AP39687 249 aaKnown RBP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 WNT5AP41221 380 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 PCYT1AP49585 367 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 MAPK12P53778 367 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 ST8SIA6P61647 398 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 TAZQ16635 292 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 KBTBD12Q3ZCT8 623 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 NDUFAF5Q5TEU4 345 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 LINGO4Q6UY18 593 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 PACS1Q6VY07 963 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 C15orf39Q6ZRI6 1047 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 ZNF34Q8IZ26 560 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 DCP1BQ8IZD4 617 aaKnown RBP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 SLC26A7Q8TE54 656 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 HEXDCQ8WVB3 486 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 UBLCP1Q8WVY7 318 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 NSMAFQ92636 917 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 DAZLQ92904 295 aaKnown RBP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 CSF3RQ99062 836 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 ACAT2Q9BWD1 397 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 PRRG4Q9BZD6 226 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 EBF3Q9H4W6 596 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 SLA2Q9H6Q3 261 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 TMEM206Q9H813 350 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 MYNNQ9NPC7 610 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 GKN1Q9NS71 199 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 DNAJC17Q9NVM6 304 aaKnown RBP4.06□□□□□ -1.76
BRCA1-212ENST00000473961 TMEM161AQ9NX61 479 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 ELOVL5Q9NYP7 299 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 SEPT10Q9P0V9 454 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 WNT16Q9UBV4 365 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 ACAD8Q9UKU7 415 aa4.06□□□□□ -1.76
BRCA1-212ENST00000473961 CKAP5Q14008 2032 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 TAF1P21675 1872 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ZCWPW2A0A1B0GU75 182 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 A0A1W2PPW3 197 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SDR42E2A6NKP2 422 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 MID1O15344 667 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 WDR1O75083 606 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 CRCPO75575 148 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 PDE9AO76083 593 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 CLDN14O95500 239 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 IGHV2-70P01814 119 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 EEF2P13639 858 aaKnown RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 EPORP19235 508 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 CCKBRP32239 447 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ABCG1P45844 678 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 PDX1P52945 283 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 TPD52P55327 224 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms