RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FAM174BQ3ZCQ3 159 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 RNF219Q5W0B1 726 aaPredicted RBP20.71■□□□□ 0.91
COL18A1-207ENST00000473212 NIPAL1Q6NVV3 410 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 TMEM179BQ7Z7N9 219 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 ABI1Q8IZP0 508 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 C10orf111Q8N326 155 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 KRTCAP2Q8N6L1 136 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PJA1Q8NG27 643 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 GTF2H4Q92759 462 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 INIPQ9NRY2 104 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PCDHB9Q9Y5E1 797 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 TET1Q8NFU7 2136 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 SLC38A8A6NNN8 435 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 AXIN1O15169 862 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PFDN6O15212 129 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 INMTO95050 263 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 CDH3P22223 829 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 IDUAP35475 653 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 SEMG2Q02383 582 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 MBOAT1Q6ZNC8 495 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 FRS2Q8WU20 508 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 MUL1Q969V5 352 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 RBM4BQ9BQ04 359 aaKnown RBP20.71■□□□□ 0.91
COL18A1-207ENST00000473212 RBM4Q9BWF3 364 aaKnown RBP20.71■□□□□ 0.91
COL18A1-207ENST00000473212 CCDC90BQ9GZT6 254 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 IPPKQ9H8X2 491 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 SLC6A13Q9NSD5 602 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 BLOC1S6Q9UL45 172 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PRSS21Q9Y6M0 314 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 PIKFYVEQ9Y2I7 2098 aa20.71■□□□□ 0.91
COL18A1-207ENST00000473212 A8MX80 341 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 KCNC4Q03721 635 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 FAM151BQ6UXP7 276 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 APOL5Q9BWW9 433 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 PAK1IP1Q9NWT1 392 aaPredicted RBP20.7■□□□□ 0.9
COL18A1-207ENST00000473212 B3GNT3Q9Y2A9 372 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 FCF1Q9Y324 198 aaKnown RBP20.7■□□□□ 0.9
COL18A1-207ENST00000473212 SNX5Q9Y5X3 404 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 PDE4DIPQ5VU43 2346 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 ELOVL7A1L3X0 281 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 CXCR6O00574 342 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 SYN3O14994 580 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 MZF1P28698 734 aaPredicted RBP20.7■□□□□ 0.9
COL18A1-207ENST00000473212 GABARAPL2P60520 117 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 EPS8Q12929 822 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 TRAF3Q13114 568 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 PCBP2Q15366 365 aaKnown RBP eCLIP20.7■□□□□ 0.92e-7■■■■■ 30.9
COL18A1-207ENST00000473212 MAPKAPK3Q16644 382 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 MILR1Q7Z6M3 343 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 MSRB3Q8IXL7 192 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 PHACTR4Q8IZ21 702 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 SLC25A37Q9NYZ2 338 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 USE1Q9NZ43 259 aa20.7■□□□□ 0.9
COL18A1-207ENST00000473212 LOC100130705A0A1B0GUX0 176 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 TMEM221A6NGB7 291 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 K7ERQ8 282 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 SLC1A7O00341 560 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 TAPBPO15533 448 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 COCHO43405 550 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 MAN1A2O60476 641 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 EOMESO95936 686 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 CORO1AP31146 461 aaKnown RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 GKP32189 559 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ATP5C1P36542 298 aaKnown RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 MAGEA10P43363 369 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 SLC11A1P49279 550 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 RAD23AP54725 363 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 CDH4P55283 916 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ISL1P61371 349 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 GPR17Q13304 367 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 PHKG1Q16816 387 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 SVOPLQ8N434 492 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 BCL7CQ8WUZ0 217 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 SH3YL1Q96HL8 342 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ZBTB18Q99592 522 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 CIPCQ9C0C6 399 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ENPP5Q9UJA9 477 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ARIH1Q9Y4X5 557 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 U3KQV3 271 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ADAM23O75077 832 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 CD9P21926 228 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 PSMA3P25788 255 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 AKT1P31749 480 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 CLCN4P51793 760 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 GP2P55259 537 aaKnown RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 GSTM4Q03013 218 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 FAM26DQ5JW98 314 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 SPANXN4Q5MJ08 99 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 NCLNQ969V3 563 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 RHBDF1Q96CC6 855 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 NODALQ96S42 347 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF347Q96SE7 839 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 TM6SF2Q9BZW4 377 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 RNF38Q9H0F5 515 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 TMEM165Q9HC07 324 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 DNMT3LQ9UJW3 386 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 CCL27Q9Y4X3 112 aa20.69■□□□□ 0.9
COL18A1-207ENST00000473212 TNPO3Q9Y5L0 923 aaKnown RBP20.69■□□□□ 0.9
COL18A1-207ENST00000473212 E2F6O75461 281 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 C1QCP02747 245 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms