RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 QSOX1O00391 747 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 LIASO43766 372 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 GAS8O95995 478 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 FTH1P02794 183 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 FOXN2P32314 431 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 LMAN1P49257 510 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 FOXK1P85037 733 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 IL10RAQ13651 578 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 BRD3Q15059 726 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 IGFBP7Q16270 282 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 PLEKHS1Q5SXH7 462 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 SEL1L2Q5TEA6 688 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 IZUMO3Q5VZ72 239 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 PACS1Q6VY07 963 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 ASB18Q6ZVZ8 466 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 ADGRF3Q8IZF5 1079 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 DSELQ8IZU8 1212 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 ELMO1Q92556 727 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 TRAPPC9Q96Q05 1148 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 KLHL25Q9H0H3 589 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 ETNK1Q9HBU6 452 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 ACTR10Q9NZ32 417 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 NBASA2RRP1 2371 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 DNAJB5O75953 348 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 IFNB1P01574 187 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 MSL3P1P0C860 447 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 PVRP15151 417 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 CYP2A7P20853 494 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 CDC25BP30305 580 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 FDFT1P37268 417 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 OASLQ15646 514 aaKnown RBP21.84■■□□□ 1.09
C9orf3-213ENST00000471978 LCN10Q6JVE6 187 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 PPP1R21Q6ZMI0 780 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 TEX19Q8NA77 164 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 OR5AR1Q8NGP9 310 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 OR13J1Q8NGT2 312 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.84■■□□□ 1.091e-8■■■■■ 41.2
C9orf3-213ENST00000471978 TRIM55Q9BYV6 548 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 FRMD8P1Q9BZ68 369 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-213ENST00000471978 SERTAD3Q9UJW9 196 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 ICKQ9UPZ9 632 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 ZNF148Q9UQR1 794 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 ASF1AQ9Y294 204 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 PIKFYVEQ9Y2I7 2098 aa21.84■■□□□ 1.09
C9orf3-213ENST00000471978 PTPN13Q12923 2485 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 HEATR9A2RTY3 570 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 E7EVH7 732 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 SUN1O94901 812 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 OR56A5P0C7T3 313 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 RORAP35398 523 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 SYTL3Q4VX76 610 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 ZNF789Q5FWF6 425 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 SPESP1Q6UW49 350 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 NAPRTQ6XQN6 538 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 HOOK3Q86VS8 718 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 ENDOVQ8N8Q3 282 aaKnown RBP21.83■■□□□ 1.09
C9orf3-213ENST00000471978 C1orf54Q8WWF1 131 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 HDAC10Q969S8 669 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 ACTR5Q9H9F9 607 aaPredicted RBP21.83■■□□□ 1.09
C9orf3-213ENST00000471978 SLC2A6Q9UGQ3 507 aa21.83■■□□□ 1.09
C9orf3-213ENST00000471978 RAB40ALP0C0E4 278 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 ACADLP28330 430 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 SHMT2P34897 504 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 GRIA1P42261 906 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 LYPLAL1Q5VWZ2 237 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 CPZQ66K79 652 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 UNC5AQ6ZN44 842 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 CDHR3Q6ZTQ4 885 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 SLC13A5Q86YT5 568 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-213ENST00000471978 TBC1D21Q8IYX1 336 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 TTC1Q99614 292 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 NLNQ9BYT8 704 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 TSGA10Q9BZW7 698 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 SLC7A5P2Q9GIP4 190 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 PCMTD2Q9NV79 361 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 POLG2Q9UHN1 485 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 GUCA1BQ9UMX6 200 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 SNX7Q9UNH6 387 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 TDRKHQ9Y2W6 561 aaKnown RBP21.82■■□□□ 1.08
C9orf3-213ENST00000471978 SPTBP11277 2137 aa21.82■■□□□ 1.08
C9orf3-213ENST00000471978 MAST4O15021 2626 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 SLC5A10A0PJK1 596 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 ARGFXA6NJG6 315 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 BHMG1C9JSJ3 638 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-213ENST00000471978 E7EQ34 232 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 OR1I1O60431 355 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 GOT2P00505 430 aaKnown RBP21.81■■□□□ 1.08
C9orf3-213ENST00000471978 ETS1P14921 441 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 ADRA1DP25100 572 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 ITGA1P56199 1179 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 PLOD1Q02809 727 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-213ENST00000471978 SNX1Q13596 522 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 TSTD2Q5T7W7 516 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 AFTPHQ6ULP2 937 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 PRUNE1Q86TP1 453 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 SYTL1Q8IYJ3 562 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 RANBP9Q96S59 729 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 RAB6BQ9NRW1 208 aa21.81■■□□□ 1.08
C9orf3-213ENST00000471978 LRRK2Q5S007 2527 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 PDGFAP04085 211 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms