RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 UGDHO60701 494 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ATP6AP2O75787 350 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 CLDN9O95484 217 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 KRT6AP02538 564 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 KRT6BP04259 564 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 CAPN1P07384 714 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 SNRPB2P08579 225 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 LINC00032P0C843 101 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 PRR35P0CG20 571 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 HOXB2P14652 356 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 GLULP15104 373 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 PBLDP30039 288 aaPredicted RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 HNRNPH1P31943 449 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 WASP42768 502 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 SLC6A12P48065 614 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 KRT6CP48668 564 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 CTSCP53634 463 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 SEC13P55735 322 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ERVPABLB-1P60509 514 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 RPS14P62263 151 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 SLC25A3Q00325 362 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF33BQ06732 778 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 TBL3Q12788 808 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 GRSF1Q12849 480 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 RPA4Q13156 261 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 SMAD4Q13485 552 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 AAK1Q2M2I8 961 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 MMEL1Q495T6 779 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 PDCD4Q53EL6 469 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 AGKQ53H12 422 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 FBXO48Q5FWF7 155 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 COQ5Q5HYK3 327 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 LETMD1Q6P1Q0 360 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 IL27RAQ6UWB1 636 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 UNC5DQ6UXZ4 953 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 BNC2Q6ZN30 1099 aaPredicted RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 GK5Q6ZS86 529 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ADGRG6Q86SQ4 1221 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 KBTBD6Q86V97 674 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 GALNT13Q8IUC8 556 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 RASGRP3Q8IV61 690 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 KLHDC8AQ8IYD2 350 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 DEFB107AQ8IZN7 70 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 FAM9CQ8IZT9 166 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 HDDC3Q8N4P3 179 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 AADATQ8N5Z0 425 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 BEND7Q8N7W2 519 aaPredicted RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 SNX31Q8N9S9 440 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 PCYOX1LQ8NBM8 494 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 OR52B6Q8NGF0 335 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 TSPEARQ8WU66 669 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ESAMQ96AP7 390 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 RCN3Q96D15 328 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 COX14Q96I36 57 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 PPP3R2Q96LZ3 170 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 CCDC138Q96M89 665 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 THTPAQ9BU02 230 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 RPP25Q9BUL9 199 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 DPEP2Q9H4A9 486 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 DCLRE1BQ9H816 532 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ACTR8Q9H981 624 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 AIG1Q9NVV5 245 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 THEGQ9P2T0 379 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 CNOT6Q9ULM6 557 aaKnown RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 FZD4Q9ULV1 537 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ASB1Q9Y576 335 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 TIMM22Q9Y584 194 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 DNMT3AQ9Y6K1 912 aaPredicted RBP9.13□□□□□ -0.95
SMC1A-205ENST00000469129 PIAS3Q9Y6X2 628 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 LRP4O75096 1905 aa9.13□□□□□ -0.95
SMC1A-205ENST00000469129 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 LOC100653049A0A140TA62 436 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 A0A1W2PP55 124 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 AIM2O14862 343 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 CHUKO15111 745 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ANGPT2O15123 496 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PLRG1O43660 514 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 RNASEH2AO75792 299 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 KRT34O76011 436 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 RPN2P04844 631 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PCCBP05166 539 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ALDOCP09972 364 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PRDX3P30048 256 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PNLIPRP1P54315 467 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 RPS21P63220 83 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PON2Q15165 354 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 NR6A1Q15406 480 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 IMPG1Q17R60 797 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 C18orf21Q32NC0 220 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 MAP7D1Q3KQU3 841 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 FBXO43Q4G163 708 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 TMEM196Q5HYL7 178 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 EOGTQ5NDL2 527 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF648Q5T619 568 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 REP15Q6BDI9 236 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PNCKQ6P2M8 343 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PRMT9Q6P2P2 845 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms