RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 BTBD1Q9H0C5 482 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 ARHGEF3Q9NR81 526 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 G3BP2Q9UN86 482 aaKnown RBP18.54■□□□□ 0.56
SMC4-209ENST00000468653 ARHGEF33A8MVX0 844 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 DCXO43602 365 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 OR4F21O95013 312 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 UROSP10746 265 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 MYCLP1P12525 358 aaPredicted RBP18.53■□□□□ 0.56
SMC4-209ENST00000468653 CALB2P22676 271 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 IGFALSP35858 605 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 PIK3CGP48736 1102 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 CCNG1P51959 295 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 DGKEP52429 567 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 AMZ2Q86W34 360 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 OR52B6Q8NGF0 335 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 ASB12Q8WXK4 309 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 PTCD3Q96EY7 689 aaKnown RBP18.53■□□□□ 0.56
SMC4-209ENST00000468653 NUSAP1Q9BXS6 441 aaKnown RBP18.53■□□□□ 0.56
SMC4-209ENST00000468653 LMAN1LQ9HAT1 526 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 FZD3Q9NPG1 666 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 ZNHIT2Q9UHR6 403 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 ZNF225Q9UK10 706 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 MRPS17Q9Y2R5 130 aaKnown RBP18.53■□□□□ 0.56
SMC4-209ENST00000468653 TIMM22Q9Y584 194 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 CAPN7Q9Y6W3 813 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 LRRC72A6NJI9 287 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 GPR89AB7ZAQ6 455 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 OR7A17O14581 309 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 PIP5K1BO14986 540 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 GPR89BP0CG08 455 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 EPB42P16452 691 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 AOC1P19801 751 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 ACSL1P33121 698 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 GGT5P36269 586 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 ERVPABLB-1P60509 514 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 LRRC32Q14392 662 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 NFE2L1Q14494 772 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 C11orf96Q7Z7L8 435 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 DCBLD1Q8N8Z6 715 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 OR2T34Q8NGX1 318 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 CDK15Q96Q40 435 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 MYOCQ99972 504 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 SLC32A1Q9H598 525 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 TAGLN3Q9UI15 199 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 FBXL21Q9UKT6 434 aa18.53■□□□□ 0.56
SMC4-209ENST00000468653 PCYT1BQ9Y5K3 369 aaPredicted RBP18.53■□□□□ 0.56
SMC4-209ENST00000468653 DNMT3AQ9Y6K1 912 aaPredicted RBP18.53■□□□□ 0.56
SMC4-209ENST00000468653 KMOO15229 486 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 KATNA1O75449 491 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 BDKRB1P46663 353 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 TMEM198Q66K66 360 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 LRRC70Q7Z2Q7 622 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 MILR1Q7Z6M3 343 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 SYNPOQ8N3V7 929 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 CDYL2Q8N8U2 506 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 OR4F6Q8NGB9 312 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 FBXL8Q96CD0 374 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 CATSPER2Q96P56 530 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 DPEP2Q9H4A9 486 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 SGK2Q9HBY8 427 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 PFDN4Q9NQP4 134 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 ITM2CQ9NQX7 267 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 KLC4Q9NSK0 619 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 BTRCQ9Y297 605 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 DOCK9Q9BZ29 2069 aa18.52■□□□□ 0.55
SMC4-209ENST00000468653 ATP6AP2A0A1C7CYW4 349 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 H0YHG0 523 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 CACNB4O00305 520 aaPredicted RBP18.51■□□□□ 0.55
SMC4-209ENST00000468653 ATP6AP2O75787 350 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 CDC16Q13042 620 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 UBXN2BQ14CS0 331 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.51■□□□□ 0.55
SMC4-209ENST00000468653 TMEM31Q5JXX7 168 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 LETMD1Q6P1Q0 360 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 ASRGL1Q7L266 308 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 SYT13Q7L8C5 426 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 TRIM69Q86WT6 500 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 KIF2BQ8N4N8 673 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 SNX31Q8N9S9 440 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 METTL6Q8TCB7 284 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 ATL1Q8WXF7 558 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 CCDC138Q96M89 665 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 APOOQ9BUR5 198 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 LNPEPQ9UIQ6 1025 aa18.51■□□□□ 0.55
SMC4-209ENST00000468653 KRT87PA6NCN2 255 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 CHURC1-FNTBB4DL54 471 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 WDR47O94967 919 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 LINC00032P0C843 101 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 TRAF3Q13114 568 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 RPA4Q13156 261 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 PTCHD3Q3KNS1 767 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 FAM83HQ6ZRV2 1179 aaPredicted RBP18.5■□□□□ 0.55
SMC4-209ENST00000468653 ADHFE1Q8IWW8 467 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 SLC7A6OSQ96CW6 309 aaPredicted RBP18.5■□□□□ 0.55
SMC4-209ENST00000468653 MARK4Q96L34 752 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 C3orf30Q96M34 536 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 TUBB1Q9H4B7 451 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 SLC23A2Q9UGH3 650 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 EBF1Q9UH73 591 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 PTGDR2Q9Y5Y4 395 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms