RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	SLC4A11	Q8NBS3	891 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	RNF128	Q8TEB7	428 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ZFAND2B	Q8WV99	257 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MOB3A	Q96BX8	217 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	DHX58	Q96C10	678 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	LINGO1	Q96FE5	620 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	IGSF21	Q96ID5	467 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MARK4	Q96L34	752 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	THUMPD3	Q9BV44	507 aa	Known RBP	4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	HIPK2	Q9H2X6	1198 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TBC1D17	Q9HA65	648 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TRPC7	Q9HCX4	862 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MRGBP	Q9NV56	204 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TBC1D7	Q9P0N9	293 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CPSF3	Q9UKF6	684 aa	Known RBP	4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SNX7	Q9UNH6	387 aa		4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SPIN1	Q9Y657	262 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC42BPA-211	ENST00000466538		A0A1W2PPI3	338 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ARHGEF37	A1IGU5	675 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	HTR3E	A5X5Y0	456 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538		H0Y626	953 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	RNASEH1	O60930	286 aa	Known RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PAPSS2	O95340	614 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	KRT19	P08727	400 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CAST	P20810	708 aa	Known RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CBL	P22681	906 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TCF7	P36402	384 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	FUT6	P51993	359 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	NANOS2	P60321	138 aa	Known RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	POU3F1	Q03052	451 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SCN1B	Q07699	218 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MFAP5	Q13361	173 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	KIR2DS3	Q14952	304 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CCDC184	Q52MB2	194 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PDSS1	Q5T2R2	415 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	C1QTNF12	Q5T7M4	302 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SFMBT2	Q5VUG0	894 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CAVIN1	Q6NZI2	390 aa	Known RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ARMC9	Q7Z3E5	817 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ABI3BP	Q7Z7G0	1075 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	NUDT13	Q86X67	352 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	NAGS	Q8N159	534 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CCDC107	Q8WV48	283 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SORCS1	Q8WY21	1168 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MUS81	Q96NY9	551 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	IL17F	Q96PD4	163 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CPNE1	Q99829	537 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	C1QTNF4	Q9BXJ3	329 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	FAM129A	Q9BZQ8	928 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	VN1R1	Q9GZP7	353 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	EVA1A	Q9H8M9	152 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MYNN	Q9NPC7	610 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TCF7L2	Q9NQB0	619 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SERINC1	Q9NRX5	453 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	OSER1	Q9NX31	292 aa		4.13	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TRAV34	A0A0B4J273	112 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	HYKK	A2RU49	373 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	DENND3	A2RUS2	1198 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TULP2	O00295	520 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ACOT8	O14734	319 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SLC28A2	O43868	658 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	BAG4	O95429	457 aa	Known RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	WDPCP	O95876	746 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	IGHV4-39	P01824	125 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	INHBA	P08476	426 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PDGFRA	P16234	1089 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CKMT2	P17540	419 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PTPN3	P26045	913 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TNFRSF8	P28908	595 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	LHX1	P48742	406 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	NR2C2	P49116	596 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ZNF132	P52740	706 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TPD52	P55327	224 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MAT1A	Q00266	395 aa	Known RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PRKAA1	Q13131	559 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SPOUT1	Q5T280	376 aa	Known RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	C9orf57	Q5W0N0	161 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MOXD1	Q6UVY6	613 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PPP1R21	Q6ZMI0	780 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SPATA21	Q7Z572	469 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SPATA19	Q7Z5L4	167 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	TLK2	Q86UE8	772 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SSMEM1	Q8WWF3	244 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SCRN2	Q96FV2	425 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	C17orf77	Q96MU5	243 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	FNBP1	Q96RU3	617 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	APOBEC3G	Q9HC16	384 aa	Known RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ABCF3	Q9NUQ8	709 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ZNF701	Q9NV72	531 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	B3GAT1	Q9P2W7	334 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	LRWD1	Q9UFC0	647 aa		4.12	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	IGLV5-45	A0A087WSX0	123 aa		4.11	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	IFIT3	O14879	490 aa	Known RBP	4.11	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CLIC2	O15247	247 aa		4.11	□□□□□ -1.75

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