RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 OR1L3Q8NH93 324 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.28■□□□□ 0.52
SF3A1-205ENST00000463818 TRAPPC9Q96Q05 1148 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 PITPNM3Q9BZ71 974 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 KLHL25Q9H0H3 589 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 EPN3Q9H201 632 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 CHST8Q9H2A9 424 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 FANCEQ9HB96 536 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 SYTL2Q9HCH5 934 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 RAB6BQ9NRW1 208 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 ACTR10Q9NZ32 417 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 TLK1Q9UKI8 766 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 ASF1AQ9Y294 204 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 TP53TG5Q9Y2B4 290 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 MAN2B2Q9Y2E5 1009 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 SLC5A10A0PJK1 596 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 GOLGA6L6A8MZA4 724 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 TMEM150CB9EJG8 249 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 MEN1O00255 615 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 OR1I1O60431 355 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 RFPL1O75677 317 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 GOT2P00505 430 aaKnown RBP18.27■□□□□ 0.52
SF3A1-205ENST00000463818 OR56A5P0C7T3 313 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 PVRP15151 417 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 NR1D1P20393 614 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ADRA1DP25100 572 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ACADLP28330 430 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 GSDMDP57764 484 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ABRQ12979 859 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 RPS6KA1Q15418 735 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 UGT8Q16880 541 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 LCN10Q6JVE6 187 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 TCTN3Q6NUS6 607 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ZNF517Q6ZMY9 492 aaPredicted RBP18.27■□□□□ 0.52
SF3A1-205ENST00000463818 UNC5AQ6ZN44 842 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 SYVN1Q86TM6 617 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 OR6P1Q8NGX9 317 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 SEC14L1Q92503 715 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 CPT1BQ92523 772 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ZNF778Q96MU6 729 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 LRFN5Q96NI6 719 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 RANBP9Q96S59 729 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 TTC1Q99614 292 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 CASS4Q9NQ75 786 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 SERTAD3Q9UJW9 196 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 RIMKLBQ9ULI2 386 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ICKQ9UPZ9 632 aa18.27■□□□□ 0.52
SF3A1-205ENST00000463818 SETXQ7Z333 2677 aaKnown RBP18.27■□□□□ 0.52
SF3A1-205ENST00000463818 ZNF106Q9H2Y7 1883 aaKnown RBP18.26■□□□□ 0.51
SF3A1-205ENST00000463818 ASH1LQ9NR48 2969 aaKnown RBP18.26■□□□□ 0.51
SF3A1-205ENST00000463818 MYO18BQ8IUG5 2567 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 BHMG1C9JSJ3 638 aaPredicted RBP18.26■□□□□ 0.51
SF3A1-205ENST00000463818 PMS2P54278 862 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 SEMA5AQ13591 1074 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 ZNF789Q5FWF6 425 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 COLEC12Q5KU26 742 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 MEI1Q5TIA1 1274 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 AFTPHQ6ULP2 937 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 APLFQ8IW19 511 aaPredicted RBP18.26■□□□□ 0.51
SF3A1-205ENST00000463818 TBC1D21Q8IYX1 336 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 DSELQ8IZU8 1212 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 GLIS1Q8NBF1 620 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 OR4L1Q8NH43 312 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 THAP4Q8WY91 577 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 CLIP3Q96DZ5 547 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 POLG2Q9UHN1 485 aa18.26■□□□□ 0.51
SF3A1-205ENST00000463818 TDRKHQ9Y2W6 561 aaKnown RBP18.26■□□□□ 0.51
SF3A1-205ENST00000463818 MSL3P1P0C860 447 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 ZSCAN5DPP0CG00 497 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 TPBGLP0DKB5 382 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 CYP2A7P20853 494 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 PLOD1Q02809 727 aaPredicted RBP18.25■□□□□ 0.51
SF3A1-205ENST00000463818 ACVR1Q04771 509 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 IGFBP7Q16270 282 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 IZUMO3Q5VZ72 239 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 SPESP1Q6UW49 350 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 CDHR3Q6ZTQ4 885 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 ZNF534Q76KX8 674 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 NLRP9Q7RTR0 991 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 HOOK3Q86VS8 718 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 ACTR5Q9H9F9 607 aaPredicted RBP18.25■□□□□ 0.51
SF3A1-205ENST00000463818 PCMTD2Q9NV79 361 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 PAK5Q9P286 719 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 TCAF1Q9Y4C2 921 aa18.25■□□□□ 0.51
SF3A1-205ENST00000463818 DNAJB5O75953 348 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 APRTP07741 180 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 RAB40ALP0C0E4 278 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 SHMT2P34897 504 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 RPL22P35268 128 aaKnown RBP18.24■□□□□ 0.51
SF3A1-205ENST00000463818 RORAP35398 523 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 CSE1LP55060 971 aaKnown RBP18.24■□□□□ 0.51
SF3A1-205ENST00000463818 ITGA1P56199 1179 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 KLRB1Q12918 225 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 IL10RAQ13651 578 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 SIX1Q15475 284 aaPredicted RBP18.24■□□□□ 0.51
SF3A1-205ENST00000463818 CCNG2Q16589 344 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 SYTL3Q4VX76 610 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 FASTKD1Q53R41 847 aaKnown RBP18.24■□□□□ 0.51
SF3A1-205ENST00000463818 ASB18Q6ZVZ8 466 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms