RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 OR4E2Q8NGC2 313 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 OR52E1Q8NGJ3 308 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 OR5K2Q8NHB8 316 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 GIMAP7Q8NHV1 300 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 KIF18AQ8NI77 898 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 SNIP1Q8TAD8 396 aaKnown RBP17.2■□□□□ 0.34
VPS52-214ENST00000463486 FBXO25Q8TCJ0 367 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 FGF11Q92914 225 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 PMEPA1Q969W9 287 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 CFAP36Q96G28 342 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 TGM7Q96PF1 710 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 MENTQ9BUN1 341 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 TSSK1BQ9BXA7 367 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 RAB17Q9H0T7 212 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 ZDHHC18Q9NUE0 388 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 HRASLS2Q9NWW9 162 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 OCIAD1Q9NX40 245 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 UTP11Q9Y3A2 253 aaKnown RBP17.2■□□□□ 0.34
VPS52-214ENST00000463486 PCDHGA7Q9Y5G6 932 aa17.2■□□□□ 0.34
VPS52-214ENST00000463486 ESYT3A0FGR9 886 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 OR6C74A6NCV1 312 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 SRRM3A6NNA2 597 aaPredicted RBP17.19■□□□□ 0.34
VPS52-214ENST00000463486 A8MU76 341 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 C9orf172C9J069 976 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 BTN3A3O00478 584 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 KPNA5O15131 536 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 C1QAP02745 245 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 CARSP49589 748 aaKnown RBP17.19■□□□□ 0.34
VPS52-214ENST00000463486 PLTPP55058 493 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 ST3GAL2Q16842 350 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 FOXR1Q6PIV2 292 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 OTOAQ7RTW8 1153 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 PRSS42Q7Z5A4 293 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 GALNT7Q86SF2 657 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 AGBL5Q8NDL9 886 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 LCN9Q8WX39 176 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 KLHL6Q8WZ60 621 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 FAM136AQ96C01 138 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 HGH1Q9BTY7 390 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 SIDT1Q9NXL6 827 aaKnown RBP17.19■□□□□ 0.34
VPS52-214ENST00000463486 KLHL42Q9P2K6 505 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 PISDQ9UG56 409 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 KLHL3Q9UH77 587 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 DMGDHQ9UI17 866 aaKnown RBP17.19■□□□□ 0.34
VPS52-214ENST00000463486 ICKQ9UPZ9 632 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 ASF1AQ9Y294 204 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 CHD6Q8TD26 2715 aa17.19■□□□□ 0.34
VPS52-214ENST00000463486 CACNA1BQ00975 2339 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 IGHV5-51A0A0C4DH38 117 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 B4E171 279 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 EIF3HO15372 352 aaKnown RBP eCLIP17.18■□□□□ 0.34
VPS52-214ENST00000463486 NVLO15381 856 aaKnown RBP17.18■□□□□ 0.34
VPS52-214ENST00000463486 RBMS1P29558 406 aaKnown RBP17.18■□□□□ 0.34
VPS52-214ENST00000463486 TSPAN7P41732 249 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 GUCY2DQ02846 1103 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 CAV1Q03135 178 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 ABRQ12979 859 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 KRT33BQ14525 404 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 PLCL1Q15111 1095 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 ACSBG2Q5FVE4 666 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 C8orf74Q6P047 294 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 KLHL35Q6PF15 583 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 UNC5DQ6UXZ4 953 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 FAM92BQ6ZTR7 304 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 KIAA0408Q6ZU52 694 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 RASGRP3Q8IV61 690 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 ZBED8Q8IZ13 594 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 ADGRF3Q8IZF5 1079 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 KCNJ9Q92806 393 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 ZDHHC12Q96GR4 267 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 PPM1MQ96MI6 270 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 MCMBPQ9BTE3 642 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 AARSD1Q9BTE6 412 aaKnown RBP17.18■□□□□ 0.34
VPS52-214ENST00000463486 B3GNT4Q9C0J1 378 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 TRIT1Q9H3H1 467 aaKnown RBP17.18■□□□□ 0.34
VPS52-214ENST00000463486 ZNF768Q9H5H4 540 aaKnown RBP17.18■□□□□ 0.34
VPS52-214ENST00000463486 XKR8Q9H6D3 395 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 ACSL6Q9UKU0 697 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 NFS1Q9Y697 457 aa17.18■□□□□ 0.34
VPS52-214ENST00000463486 BTN3A1O00481 513 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 MATN4O95460 622 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 JMJD7P0C870 316 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 CHRM3P20309 590 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 ATP5DP30049 168 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 SLC5A2P31639 672 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 CSTF2P33240 577 aaKnown RBP eCLIP17.17■□□□□ 0.34
VPS52-214ENST00000463486 EIF2S3P41091 472 aaKnown RBP17.17■□□□□ 0.34
VPS52-214ENST00000463486 ABCG1P45844 678 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
VPS52-214ENST00000463486 MC2RQ01718 297 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 TMED2Q15363 201 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 IRGCQ6NXR0 463 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 AMIGO1Q86WK6 493 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 ZBTB2Q8N680 514 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 NBEAQ8NFP9 2946 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 FLVCR1-AS1Q8TAF5 88 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 USP7Q93009 1102 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 SLC41A2Q96JW4 573 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms