RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 C17orf82Q86X59 251 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-202ENST00000463060 GPSM1Q86YR5 675 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 SLC25A45Q8N413 288 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 PHC3Q8NDX5 983 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 OR6Y1Q8NGX8 325 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 RDH11Q8TC12 318 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 SCYL1Q96KG9 808 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 SELENOSQ9BQE4 189 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 KCNH6Q9H252 994 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 FSCN3Q9NQT6 498 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 UCKL1Q9NWZ5 548 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 ZNF624Q9P2J8 865 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-202ENST00000463060 COPG2Q9UBF2 871 aa13.99□□□□□ -0.17
COL6A1-202ENST00000463060 BIRC5O15392 142 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 CFIP05156 583 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 BPGMP07738 259 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 RETP07949 1114 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 F3P13726 295 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 CPA3P15088 417 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 CHN1P15882 459 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 XRCC1P18887 633 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-202ENST00000463060 SLC19A1P41440 591 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 RPIAP49247 311 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 IRX4P78413 519 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 PCLAFQ15004 111 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 TCEA2Q15560 299 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 HLA-BQ31612 363 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 TRIM61Q5EBN2 209 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.98□□□□□ -0.17
COL6A1-202ENST00000463060 IL27RAQ6UWB1 636 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 ZYG11AQ6WRX3 759 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 SFTPA2Q8IWL1 248 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 TBC1D21Q8IYX1 336 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 NAGSQ8N159 534 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 ANKRD42Q8N9B4 389 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 OR5AR1Q8NGP9 310 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 OR5K2Q8NHB8 316 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 LMX1AQ8TE12 382 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 SKA2Q8WVK7 121 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-202ENST00000463060 TWSG1Q9GZX9 223 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 IQCGQ9H095 443 aaKnown RBP13.98□□□□□ -0.17
COL6A1-202ENST00000463060 CNOT10Q9H9A5 744 aaKnown RBP13.98□□□□□ -0.17
COL6A1-202ENST00000463060 IL21RQ9HBE5 538 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 SIRPGQ9P1W8 387 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
COL6A1-202ENST00000463060 RAB23Q9ULC3 237 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 RNF112Q9ULX5 631 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 CABIN1Q9Y6J0 2220 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 USP34Q70CQ2 3546 aa13.98□□□□□ -0.17
COL6A1-202ENST00000463060 NEMP2A6NFY4 417 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 OR5K4A6NMS3 321 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 OR52A4PA6NMU1 304 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 SYCE1LA8MT33 242 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 PDZK1P1A8MUH7 402 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 UBXN8O00124 270 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 MYO1CO00159 1063 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 IFRD1O00458 451 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 FFAR2O15552 330 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 SNX2O60749 519 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 CATP04040 527 aaKnown RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 MTHFD1P11586 935 aaKnown RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 ATP5F1P24539 256 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 EPHA8P29322 1005 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 NBL1P41271 181 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 SERPINB4P48594 390 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 ARRB1P49407 418 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 AP1S2P56377 157 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 UBE2IP63279 158 aaKnown RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 NFKB2Q00653 900 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 SEPT7Q16181 437 aaKnown RBP13.97□□□□□ -0.17
COL6A1-202ENST00000463060 GKN2Q86XP6 184 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 SFRP1Q8N474 314 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 PDPRQ8NCN5 879 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 FAM46DQ8NEK8 389 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 CFAP61Q8NHU2 1237 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 FAM76AQ8TAV0 307 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 MCOLN3Q8TDD5 553 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 SAP25Q8TEE9 199 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 C12orf66Q96MD2 445 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 FOPNLQ96NB1 174 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 CAMK1GQ96NX5 476 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 MENTQ9BUN1 341 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 IRF2BPLQ9H1B7 796 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 MVB12BQ9H7P6 319 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 MLXIPLQ9NP71 852 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 OXSMQ9NWU1 459 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 NKIRAS1Q9NYS0 192 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 ASF1AQ9Y294 204 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 ADAMTS9Q9P2N4 1935 aa13.97□□□□□ -0.17
COL6A1-202ENST00000463060 FRYLO94915 3013 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 ANKRD12Q6UB98 2062 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 KIR2DS5A0A0G2JLQ3 304 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 PRAMEF33A0A0G2JMD5 474 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 A0A0G2JNG1 304 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 A8MT66 165 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 KIR2DS3K7RE56 304 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 TAPBPO15533 448 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 NOBOXO60393 691 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 SDC3O75056 442 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms