RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PCDHAC2Q9Y5I4 1007 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 COL1A2P08123 1366 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 OR14I1A6ND48 311 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 POU2F1P14859 743 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 DAOAP59103 153 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 SYVN1Q86TM6 617 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 IGFN1Q86VF2 1251 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 SLC15A3Q8IY34 581 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 TXNDC5Q8NBS9 432 aaKnown RBP15.54■□□□□ 0.08
SMC4-204ENST00000462787 ZNF486Q96H40 463 aaPredicted RBP15.54■□□□□ 0.08
SMC4-204ENST00000462787 BTN2A3PQ96KV6 586 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 KCNC2Q96PR1 638 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 SGK2Q9HBY8 427 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 ZSCAN32Q9NX65 697 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 VPS51Q9UID3 782 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 DNMT3LQ9UJW3 386 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 MKL2Q9ULH7 1088 aa15.54■□□□□ 0.08
SMC4-204ENST00000462787 FMN2Q9NZ56 1722 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 HOXA2O43364 376 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 HSD17B1P14061 328 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PTGER3P43115 390 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 SCNN1GP51170 649 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 RHAGQ02094 409 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MBTD1Q05BQ5 628 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ABHD18Q0P651 414 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 RNASE12Q5GAN4 147 aaKnown RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PHC2Q8IXK0 858 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 KLHL6Q8WZ60 621 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 EXOC2Q96KP1 924 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PEBP4Q96S96 227 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 SYT11Q9BT88 431 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PAQR5Q9NXK6 330 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 SEC14L4Q9UDX3 406 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PCDHB3Q9Y5E6 796 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 TRPV2Q9Y5S1 764 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 FAM86C2PA6NEL3 165 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 NUAK1O60285 661 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 HPGDP15428 266 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 LAPTM5Q13571 262 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.53■□□□□ 0.081e-13■■■■■ 65.9
SMC4-204ENST00000462787 CYP4V2Q6ZWL3 525 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 PEG10Q86TG7 708 aaKnown RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 METTL3Q86U44 580 aaKnown RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 CPNE9Q8IYJ1 553 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 TMEM199Q8N511 208 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 VANGL1Q8TAA9 524 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 FCRL4Q96PJ5 515 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MAPKAP1Q9BPZ7 522 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 HERPUD2Q9BSE4 406 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 AARSD1Q9BTE6 412 aaKnown RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 ABHD16BQ9H3Z7 469 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 SOX17Q9H6I2 414 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMC4-204ENST00000462787 SPIN1Q9Y657 262 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 ZNF541Q9H0D2 1346 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 SMIM28A0A1B0GU29 152 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ZSCAN5BA6NJL1 495 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 A8MX80 341 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PLOD2O00469 737 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 CAPN15O75808 1086 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ACSL1P33121 698 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 DSC3Q14574 896 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ZNF678Q5SXM1 525 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 GJD3Q8N144 294 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MND1Q9BWT6 205 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 DPEP3Q9H4B8 488 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 BRD9Q9H8M2 597 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 FBRSL1Q9HCM7 1045 aaKnown RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 UCKL1Q9NWZ5 548 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ZNF282Q9UDV7 671 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 CXCL11O14625 94 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ANXA4P09525 319 aaPredicted RBP15.53■□□□□ 0.08
SMC4-204ENST00000462787 CXCR3P49682 368 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PSEN2P49810 448 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MS4A2Q01362 244 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 TBC1D25Q3MII6 688 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 ADNP2Q6IQ32 1131 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 NANOGP8Q6NSW7 305 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 LGI4Q8N135 537 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MYRFLQ96LU7 910 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MNTQ99583 582 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 GPR20Q99678 358 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 NANOGQ9H9S0 305 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 HMGXB4Q9UGU5 601 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 TRPS1Q9UHF7 1281 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 NENFQ9UMX5 172 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 PCDHB9Q9Y5E1 797 aa15.53■□□□□ 0.08
SMC4-204ENST00000462787 MID1O15344 667 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 ECI2O75521 394 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 CYP3A5P20815 502 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 CSTF2P33240 577 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMC4-204ENST00000462787 OPRL1P41146 370 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 MANFP55145 182 aaKnown RBP15.52■□□□□ 0.08
SMC4-204ENST00000462787 CDKL1Q00532 357 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 GRM2Q14416 872 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 SOWAHAQ2M3V2 549 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 COQ5Q5HYK3 327 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 CCDC32Q9BV29 185 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms