RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 TRIT1Q9H3H1 467 aaKnown RBP21.89■■□□□ 1.09
C9orf3-209ENST00000460573 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.89■■□□□ 1.09
C9orf3-209ENST00000460573 LHX6Q9UPM6 363 aa21.89■■□□□ 1.09
C9orf3-209ENST00000460573 AK5Q9Y6K8 562 aa21.89■■□□□ 1.09
C9orf3-209ENST00000460573 V9GYY5 206 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-209ENST00000460573 IGHV1OR21-1A0A087WYE8 117 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 RIPK2O43353 540 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 PIAS1O75925 651 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 RPLP0P05388 317 aaKnown RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 RGS4P49798 205 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 LIMK2P53671 638 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 CDKN2DP55273 166 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 OR1D5P58170 312 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 CCL7P80098 99 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 TIAL1Q01085 375 aaKnown RBP eCLIP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 INSM1Q01101 510 aaPredicted RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 POU4F1Q01851 419 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 PDAP1Q13442 181 aaKnown RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 GSPT2Q8IYD1 628 aaKnown RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 ACVR1CQ8NER5 493 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 OR5K2Q8NHB8 316 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 GIMAP7Q8NHV1 300 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 SKA2Q8WVK7 121 aaPredicted RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 ATXN7L3BQ96GX2 97 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 AHCYL2Q96HN2 611 aaKnown RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 SLC24A2Q9UI40 661 aa21.88■■□□□ 1.09
C9orf3-209ENST00000460573 RALYQ9UKM9 306 aaKnown RBP21.88■■□□□ 1.09
C9orf3-209ENST00000460573 DUX1O43812 170 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 MPC1LP0DKB6 136 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 SLC12A2P55011 1212 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 CLDN6P56747 220 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 ABRQ12979 859 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 SPIDRQ14159 915 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 ACSBG2Q5FVE4 666 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 DUS1LQ6P1R4 473 aaKnown RBP21.87■■□□□ 1.09
C9orf3-209ENST00000460573 TTC23LQ6PF05 361 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 KLHL35Q6PF15 583 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 PHC3Q8NDX5 983 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 TSPAN17Q96FV3 270 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 GPR22Q99680 433 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 SLC30A3Q99726 388 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 POPDC3Q9HBV1 291 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 RAXQ9Y2V3 346 aa21.87■■□□□ 1.09
C9orf3-209ENST00000460573 PRAMEF33A0A0G2JMD5 474 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 A0A1W2PQM1 296 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 TAF4O00268 1085 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 UBXN7O94888 489 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 MATN4O95460 622 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 CPNE6O95741 557 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 CD1CP29017 333 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 CCNFP41002 786 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 PLCL1Q15111 1095 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 CDCP2Q5VXM1 449 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 EMBQ6PCB8 327 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 C19orf48Q6RUI8 117 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 ZNF761Q86XN6 746 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-209ENST00000460573 CNPY4Q8N129 248 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 MAGEC3Q8TD91 643 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 TBC1D10AQ9BXI6 508 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 PARD6BQ9BYG5 372 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 TFB2MQ9H5Q4 396 aaKnown RBP21.86■■□□□ 1.09
C9orf3-209ENST00000460573 SYTL2Q9HCH5 934 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 MTO1Q9Y2Z2 717 aaKnown RBP21.86■■□□□ 1.09
C9orf3-209ENST00000460573 IKBKGQ9Y6K9 419 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 KNTC1P50748 2209 aa21.86■■□□□ 1.09
C9orf3-209ENST00000460573 MT-CO3P00414 261 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 AMD1P17707 334 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 IL2P60568 153 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 TARDBPQ13148 414 aaKnown RBP eCLIP21.85■■□□□ 1.09
C9orf3-209ENST00000460573 EFTUD2Q15029 972 aaKnown RBP eCLIP21.85■■□□□ 1.094e-7■■■■□ 19.4
C9orf3-209ENST00000460573 AMZ1Q400G9 498 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 UBAP2Q5T6F2 1119 aaKnown RBP21.85■■□□□ 1.09
C9orf3-209ENST00000460573 WDR74Q6RFH5 385 aaPredicted RBP21.85■■□□□ 1.09
C9orf3-209ENST00000460573 PAQR3Q6TCH7 311 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 RBM44Q6ZP01 1051 aaKnown RBP21.85■■□□□ 1.09
C9orf3-209ENST00000460573 PIM3Q86V86 326 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 DCUN1D3Q8IWE4 304 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 CPNE9Q8IYJ1 553 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 OR5AR1Q8NGP9 310 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 CFAP61Q8NHU2 1237 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 SLC44A1Q8WWI5 657 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 GRAMD1AQ96CP6 724 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 DCBLD2Q96PD2 775 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 OLFM1Q99784 485 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 CCDC77Q9BR77 488 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 RAB21Q9UL25 225 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 SLC39A10Q9ULF5 831 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 CLCA2Q9UQC9 943 aa21.85■■□□□ 1.09
C9orf3-209ENST00000460573 TMX2-CTNND1H3BSU7 103 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 INHBAP08476 426 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 ITGA2BP08514 1039 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 SAT1P21673 171 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 PPM1FP49593 454 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-209ENST00000460573 TAS2R39P59534 338 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 SLC29A2Q14542 456 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 USP10Q14694 798 aaKnown RBP21.84■■□□□ 1.09
C9orf3-209ENST00000460573 CYHR1Q6ZMK1 362 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 NKAPQ8N5F7 415 aaKnown RBP21.84■■□□□ 1.09
C9orf3-209ENST00000460573 LCN9Q8WX39 176 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 RAD51AP1Q96B01 352 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms