RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CPNE6O95741 557 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 MT-CO3P00414 261 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 PROS1P07225 676 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 TPBGLP0DKB5 382 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 TYRP1P17643 537 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 NDUFS1P28331 727 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 PRKG2Q13237 762 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 KRT33BQ14525 404 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 SLMAPQ14BN4 828 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 KLHL38Q2WGJ6 581 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 CCSMST1Q4G0I0 132 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.48□□□□□ -0.41
COL18A1-206ENST00000459895 CYS1Q717R9 158 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 GALNT15Q8N3T1 639 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 PHC3Q8NDX5 983 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 CFAP61Q8NHU2 1237 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
COL18A1-206ENST00000459895 LINGO1Q96FE5 620 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 AHCYL2Q96HN2 611 aaKnown RBP12.48□□□□□ -0.41
COL18A1-206ENST00000459895 CCDC74BQ96LY2 380 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 FERD3LQ96RJ6 166 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 GPR22Q99680 433 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 SCNM1Q9BWG6 230 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 XKR8Q9H6D3 395 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 CAB39LQ9H9S4 337 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 LATS2Q9NRM7 1088 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 TXNDC16Q9P2K2 825 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 DHRS7Q9Y394 339 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 BTN3A1O00481 513 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 RIPK2O43353 540 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 TSPAN12O95859 305 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ABHD2P08910 425 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 THRAP10827 490 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 HOXB3P14651 431 aaPredicted RBP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ZNF37AP17032 561 aaPredicted RBP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 SAT1P21673 171 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 MPSTP25325 297 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 PKLRP30613 574 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 PMS2P54278 862 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 TAS2R39P59534 338 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ABRQ12979 859 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 TARDBPQ13148 414 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 BMPR2Q13873 1038 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 GRB7Q14451 532 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ISXQ2M1V0 245 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ERCC6LQ2NKX8 1250 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 PAQR3Q6TCH7 311 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 USP53Q70EK8 1073 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 CEP97Q8IW35 865 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 TBC1D21Q8IYX1 336 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 EIF1ADQ8N9N8 165 aaKnown RBP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 MENTQ9BUN1 341 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 SEMA6CQ9H3T2 930 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 EPB41L1Q9H4G0 881 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 KLHL42Q9P2K6 505 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 TDRKHQ9Y2W6 561 aaKnown RBP12.47□□□□□ -0.41
COL18A1-206ENST00000459895 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 COLEC10Q9Y6Z7 277 aa12.47□□□□□ -0.41
COL18A1-206ENST00000459895 IGHV5-10-1A0A0J9YXX1 117 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 A0A1W2PNU3 283 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 AGRPO00253 132 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 PHGDHO43175 533 aaKnown RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 PSIP1O75475 530 aaKnown RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 MATN4O95460 622 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 C1orf105O95561 183 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 RPN2P04844 631 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 ENO3P13929 434 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 CD9P21926 228 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 CCKBRP32239 447 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 INHBCP55103 352 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 ZKSCAN8Q15776 578 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 UAP1Q16222 522 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 PHF19Q5T6S3 580 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 TMEM207Q6UWW9 146 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 ZNF574Q6ZN55 896 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 NEK10Q6ZWH5 1172 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 TRMT10CQ7L0Y3 403 aaKnown RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 CMC1Q7Z7K0 106 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 OOSP2Q86WS3 158 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 RASGRP3Q8IV61 690 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 LMNTD1Q8N9Z9 388 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 RCBTB1Q8NDN9 531 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 OR4D9Q8NGE8 314 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 LCN9Q8WX39 176 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 NCSTNQ92542 709 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 INPP5DQ92835 1189 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 IL17FQ96PD4 163 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 TGM7Q96PF1 710 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 CYTH2Q99418 400 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 PAFAH2Q99487 392 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms