RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 GTF2IRD2Q86UP8 949 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 RGL4Q8IZJ4 473 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 C8orf59Q8N0T1 100 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 LEMD2Q8NC56 503 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 RHBDF1Q96CC6 855 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 MYOCQ99972 504 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 RHNO1Q9BSD3 238 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 INPP5KQ9BT40 448 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 NUDT4Q9NZJ9 180 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 CXCR6O00574 342 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 GAPDHSO14556 408 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 ABCB7O75027 752 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 SEC22BO75396 215 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 SLC25A14O95258 325 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 HTR1BP28222 390 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 NEK2P51955 445 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 LSM3P62310 102 aaKnown RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 PRKCZQ05513 592 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 ITGADQ13349 1161 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 PON2Q15165 354 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 MAPKAPK3Q16644 382 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 C6orf141Q5SZD1 244 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 MFSD14CQ5VZR4 134 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 NCEH1Q6PIU2 408 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 DCDC5Q6ZRR9 648 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 CARNMT1Q8N4J0 409 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 WFDC5Q8TCV5 224 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 NCLNQ969V3 563 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 FUNDC2Q9BWH2 189 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 ZNF490Q9ULM2 529 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 TMEM189-UBE2V1I3L0A0 370 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 PRMT5O14744 637 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-203ENST00000458591 SYN3O14994 580 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 TULP3O75386 442 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 STC2O76061 302 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 BCL10O95999 233 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ESR1P03372 595 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 CYP4B1P13584 511 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 PTGER3P43115 390 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 SLC11A2P49281 568 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 CLCN4P51793 760 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 IL1RL1Q01638 556 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 CD300CQ08708 224 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 NR1D2Q14995 579 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ADGRG2Q8IZP9 1017 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 RNF175Q8N4F7 328 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 LHX3Q9UBR4 397 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 COQ6Q9Y2Z9 468 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ANGPTL3Q9Y5C1 460 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 DIRAS1O95057 198 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 LRATO95237 230 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 EOMESO95936 686 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 JAK1P23458 1154 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 CDKN2CP42773 168 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 TMBIM6P55061 237 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 PPP2R2BQ00005 443 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 SLC14A1Q13336 389 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 CBX2Q14781 532 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-203ENST00000458591 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ZNF551Q7Z340 670 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-203ENST00000458591 FKBP10Q96AY3 582 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 SDCCAG3Q96C92 435 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ADGRE3Q9BY15 652 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 DPY30Q9C005 99 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 GNPTGQ9UJJ9 305 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 DLGAP4Q9Y2H0 992 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-203ENST00000458591 PCDHB14Q9Y5E9 798 aa13.86□□□□□ -0.19
SCFD1-203ENST00000458591 ELOVL7A1L3X0 281 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 SMAD6O43541 496 aaKnown RBP13.85□□□□□ -0.19
SCFD1-203ENST00000458591 BCAS1O75363 584 aaPredicted RBP13.85□□□□□ -0.19
SCFD1-203ENST00000458591 GMNNO75496 209 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 CLDN7O95471 211 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 PRAMEF1O95521 474 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 SERPINA1P01009 418 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 NPPAP01160 153 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 PGRP06401 933 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 TACR1P25103 407 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 PSMA3P25788 255 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 FPGSQ05932 587 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 CPSF6Q16630 551 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCFD1-203ENST00000458591 FAM26DQ5JW98 314 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 DET1Q7L5Y6 550 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 OR52E6Q96RD3 313 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 ALOXE3Q9BYJ1 711 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 ASB8Q9H765 288 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 WWOXQ9NZC7 414 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 DNAJB9Q9UBS3 223 aa13.85□□□□□ -0.19
SCFD1-203ENST00000458591 AFF4Q9UHB7 1163 aaKnown RBP13.85□□□□□ -0.19
SCFD1-203ENST00000458591 VPS4AQ9UN37 437 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms