RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CAPZA1P52907 286 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CRYBB1P53674 252 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 PRMT2P55345 433 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 BCAR1P56945 870 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MAT1AQ00266 395 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 IFFO1Q0D2I5 559 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MERTKQ12866 999 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 RIN1Q13671 783 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 TMEM132BQ14DG7 1078 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 LARS2Q15031 903 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 USF2Q15853 346 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 UAP1Q16222 522 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 HNRNPA1L2Q32P51 320 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 NADK2Q4G0N4 442 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PDCD4Q53EL6 469 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 KLHL26Q53HC5 615 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CCDC157Q569K6 752 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ZNF484Q5JVG2 852 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 BZW1Q7L1Q6 419 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 PLCZ1Q86YW0 608 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 LINC00346Q8IVM7 164 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS41-209ENST00000457055 LEMD2Q8NC56 503 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 RNF169Q8NCN4 708 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 NSUN7Q8NE18 718 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 ZNF397Q8NF99 534 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 OR8J2Q8NGG1 315 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 UBA3Q8TBC4 463 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CHURC1Q8WUH1 139 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PSPC1Q8WXF1 523 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 RIN2Q8WYP3 895 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 CORO2AQ92828 525 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ZNF274Q96GC6 653 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 APOPT1Q96IL0 206 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ZFYVE19Q96K21 471 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 FAM227BQ96M60 508 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 OLFM3Q96PB7 478 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MED15Q96RN5 788 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PKP2Q99959 881 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 FERMT1Q9BQL6 677 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ACBD6Q9BR61 282 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 REEP2Q9BRK0 252 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 TUBB6Q9BUF5 446 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CACNG6Q9BXT2 260 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ADGRE3Q9BY15 652 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PKIBQ9C010 78 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 LHX5Q9H2C1 402 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 OR51B5Q9H339 312 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 METTL8Q9H825 291 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 METTL7AQ9H8H3 244 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PANK3Q9H999 370 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 AGO3Q9H9G7 860 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 NOD2Q9HC29 1040 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 SLC40A1Q9NP59 571 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ZDHHC18Q9NUE0 388 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 GIMAP4Q9NUV9 329 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 INTS9Q9NV88 658 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 IGSF9Q9P2J2 1179 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 TUBE1Q9UJT0 475 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 LEF1Q9UJU2 399 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 RNF24Q9Y225 148 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ERGIC3Q9Y282 383 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MAN2B2Q9Y2E5 1009 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 DTX4Q9Y2E6 619 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MRPS7Q9Y2R9 242 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 WBP11Q9Y2W2 641 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 COQ6Q9Y2Z9 468 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 REXO2Q9Y3B8 237 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 ASB1Q9Y576 335 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PKD1L3Q7Z443 1732 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 ADGRF5Q8IZF2 1346 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 CDHR2Q9BYE9 1310 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 NHSQ6T4R5 1651 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 A0A1W2PRG0 241 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 TRBC2A0A5B9 178 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 TRIM49BA6NDI0 452 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 SUPT3HB4E1H0 165 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 E7ENQ6 273 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 SLC33A1O00400 549 aaPredicted RBP5.32□□□□□ -1.56
VPS41-209ENST00000457055 DCLK1O15075 740 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 PPIP5K2O43314 1243 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 HTRA2O43464 458 aaPredicted RBP5.32□□□□□ -1.56
VPS41-209ENST00000457055 NDUFA2O43678 99 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 VPS4BO75351 444 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 GMNNO75496 209 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 ECI2O75521 394 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 WBP4O75554 376 aaKnown RBP5.32□□□□□ -1.56
VPS41-209ENST00000457055 TOM1L1O75674 476 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 UFL1O94874 794 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 SUN1O94901 812 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 TFRCP02786 760 aaKnown RBP5.32□□□□□ -1.56
VPS41-209ENST00000457055 CALCBP10092 127 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 UROSP10746 265 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 BRAFP15056 766 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 ITGB6P18564 788 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 APEX1P27695 318 aaKnown RBP5.32□□□□□ -1.56
VPS41-209ENST00000457055 SFNP31947 248 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 HMGCLP35914 325 aa5.32□□□□□ -1.56
VPS41-209ENST00000457055 PGM1P36871 562 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms